SNP Profiles matching NACIONAL

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	CC	GG	TT	TT	CC	CC	GG	TT	AA	TT	AA
1._APA_4___	TT	CC	CC	CC	GG	TT	TT	CC	CC	GG	TT	AA	TT	AA
2._SPEC_41_/6-18___	TT	CC	__	CC	GG	TT	__	CC	CC	GG	__	AA	__	AA
3._M_8_[SUR]___	TT	CC	TT	CC	GG	TT	TT	CC	CC	GG	TT	AA	TT	AA
4._SC_9_[UNK]___	TT	CC	CC	CC	GG	GG	TT	CC	CC	GG	TT	AA	TT	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CC	CC	TT	AC	GG	CC	TT	AA	CC	TT	AA	CC
1._APA_4___	GG	AA	CC	CC	TT	AC	GG	CC	TT	AA	CC	TT	AA	CC
2._SPEC_41_/6-18___	GG	__	CC	__	TT	CC	__	CG	AT	AA	CC	__	AA	CC
3._M_8_[SUR]___	AA	AA	CC	CC	TT	CC	GG	CC	TT	AA	CC	TT	AA	CC
4._SC_9_[UNK]___	GG	AA	CC	CC	TT	AC	GG	CC	TT	AA	TT	TT	AA	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	GG	TT	GG	GG	TT	TT	AA	TT	TT	GG	AA	CC	GG
1._APA_4___	AA	GG	TT	GG	GG	TT	TT	AA	TT	TT	GG	AA	CC	GG
2._SPEC_41_/6-18___	AA	__	TT	GG	GG	TT	TT	__	__	TT	GG	__	__	GG
3._M_8_[SUR]___	AA	GG	TT	GG	GG	TT	TT	AA	TT	TT	GG	AA	CC	GG
4._SC_9_[UNK]___	AA	GG	TT	GG	GG	TT	TT	AA	AA	TT	GG	AA	CC	GG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	TT	CC	AA	CC	AA	TT	CC	TT	AA	CC	TT	GG	TT	GG
1._APA_4___	TT	CC	AA	CC	AA	TT	CC	TT	AA	CC	TT	GG	TT	GG
2._SPEC_41_/6-18___	__	__	AA	CC	AA	__	CC	__	AA	__	TT	__	__	__
3._M_8_[SUR]___	TT	CC	AA	CC	AA	TT	TT	TT	AA	__	TT	GG	TT	GG
4._SC_9_[UNK]___	TT	CC	AA	CC	AA	TT	TT	TT	AA	CC	TT	GG	TT	GG

	57	58	59	60
_Input profile	GG	GG	TT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._APA_4___	GG	GG	TT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._SPEC_41_/6-18___	GG	__	TT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._M_8_[SUR]___	GG	GG	TT	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._SC_9_[UNK]___	GG	GG	CC	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: APA_5 RUQ_1695

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.631 Nan
0.142 Par
0.196

1._APA_4 RUQ_843

identical
60 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.631 Nan
0.142 Par
0.196

2._SPEC_41_/6-18 RUQ_1325

96.1 %
38 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

3._M_8_[SUR] RUQ_1672

92.4 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.791 IMC
0.159

4._SC_9_[UNK] RUQ_44

90 %
60 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

Population Assignment:

View Data

Ame
0.997

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1237	53	TcSNP1253	54	TcSNP1275	55	TcSNP1293
56	TcSNP1401	57	TcSNP1404	58	TcSNP1458	59	TcSNP1524	60	TcSNP1527

SNP Profiles matching NACIONAL

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Input profile: APA_5 RUQ_1695

1._APA_4 RUQ_843

identical 60 shared markers

2._SPEC_41_/6-18 RUQ_1325

96.1 % 38 shared markers

3._M_8_[SUR] RUQ_1672

92.4 % 59 shared markers

4._SC_9_[UNK] RUQ_44

90 % 60 shared markers

identical
60 shared markers

96.1 %
38 shared markers

92.4 %
59 shared markers

90 %
60 shared markers