SNP Profiles matching NACIONAL

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCGGGGGGTTGGTTAATTTTTTAACC
1._B_12_/2_[POU]___
TTCCGGGGGGTTGGTTAATTTTTTAACC
2._SC_9_[UNK]___
TTCCGGGGGGTTGGTTAATTTTTTAACC
3._N_38_[T38]___
TTCCGGGGGG__GGTTAATTTTTTAA__
4._BE_8___
ATCTGGGGGGTTTTTTAAGTTTTTAACC
5._EEG_8___
TTCCGGGGGGTTTTTTAATTTTTTAACC
6._MATINA_1_/6___
TTCCGGGGGGTTGGTTAATTTTTTAACC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCTTGGCCAAGGTTAAAATTTTGGGG
1._B_12_/2_[POU]___
AACCTTGGCCAAGGTTAAAATTTTGGGG
2._SC_9_[UNK]___
AACCTTGGCCAAGGTTAAAATTTTGGGG
3._N_38_[T38]___
AACTTTGGCCAAGGTTAAAATTTTGGGG
4._BE_8___
AACCCTGGCCAAGGTTAAAATTTTGGGG
5._EEG_8___
AACTCTGGCCAAGGTTAAAATTTTGGGT
6._MATINA_1_/6___
AATTTTGGCCAAGGTTAAAATTTTGGGG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTGGAACCAATTTTAATTCCGGCCTTCC
1._B_12_/2_[POU]___
TTGGAACCAATTTTAATTCCGGCCTTCC
2._SC_9_[UNK]___
TTGGAACCAATTTTAATTCCGGACTTCC
3._N_38_[T38]___
TTCGAACCAATTTTACTTCCAG__TTCC
4._BE_8___
TTGGAACCAATTTTAATTCCGGACTTCC
5._EEG_8___
TTGGAACCAATTTTAATTCGGGACTTCC
6._MATINA_1_/6___
TTGGAACCAATTCCAATTCCGGACTTCC
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
CCAAGGAATTAATTGGCCCCTTGGGGCC
1._B_12_/2_[POU]___
CCAAGGAATTAATTGGCCCCTTGGGGCC
2._SC_9_[UNK]___
CCAAGGAATTAATTGGCCCCTTGGGGCC
3._N_38_[T38]___
CTAAGGAATTAATTGGCCACTTGGTTCC
4._BE_8___
CCAAGGAATTAGTTGGCCCCTTTTGGCC
5._EEG_8___
CCAAGGAATTAAGTGGCCCCTTTTGGCC
6._MATINA_1_/6___
CCAAGGAATTAAGGGGCCCCTTTTTTCC
 57 58 59            
_Input profile
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._B_12_/2_[POU]___
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._SC_9_[UNK]___
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._N_38_[T38]___
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._BE_8___
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._EEG_8___
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
6._MATINA_1_/6___
CCCCTTX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: EET_48_[ECU] RUQ_1693

 
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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.997

1._B_12_/2_[POU] RUQ_436

identical
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.997

2._SC_9_[UNK] RUQ_44

99.2 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.997

3._N_38_[T38] RUQ_1159

92.9 %
56 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.987

4._BE_8 RUQ_1694

91.5 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.880 Par
0.102

5._EEG_8 RUQ_1726

91.5 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.968

6._MATINA_1_/6 RUQ_1715

90.7 %
59 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
Ame
0.998

 

  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1293 7TcSNP1275 8TcSNP1253 9TcSNP1230 10TcSNP1205
11TcSNP1144 12TcSNP1112 13TcSNP1062 14TcSNP1053 15TcSNP1019
16TcSNP1010 17TcSNP999 18TcSNP998 19TcSNP945 20TcSNP899
21TcSNP872 22TcSNP836 23TcSNP835 24TcSNP823 25TcSNP800
26TcSNP739 27TcSNP731 28TcSNP723 29TcSNP702 30TcSNP660
31TcSNP645 32TcSNP644 33TcSNP642 34TcSNP640 35TcSNP602
36TcSNP591 37TcSNP589 38TcSNP577 39TcSNP546 40TcSNP529
41TcSNP522 42TcSNP519 43TcSNP421 44TcSNP363 45TcSNP329
46TcSNP305 47TcSNP290 48TcSNP230 49TcSNP194 50TcSNP189
51TcSNP176 52TcSNP144 53TcSNP143 54TcSNP131 55TcSNP52
56TcSNP49 57TcSNP33 58TcSNP19 59TcSNP13