SNP Profiles matching SIAL 98

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCCAAAAAAGGAACCAAGGGGAAAACC
1._BE_10___
CCCCAAAAAAGGAACCAAGGGGAAAACC
2._B_12_/2_[POU]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
3._SC_9_[UNK]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._AMELONADO_[VAR]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._LCT_EEN_46___
CCCCAAAAAAGGAACCAAGGGGAAAACC
6._AMELONADO_[VAR]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._SIAL_42___
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._GU_207___
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._SIAL_70___
CCCCAAAAAAGGAACCAAGGAGAAAACC
10._SIAL_88___
CCCCAAAAAAGGAACCAAGGAAAAAACC
11._MATINA_1_/6___
CCAAAAAAAAGGAACCAAGGAAAAAACC
12._MATINA_1_/6___
CCAAAAAAAAGGAACCAAGGAAAAAACC
13._CC_37___
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIC_7___
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._N_38_[T38]___
CCCCAAAAAAGGAAACAAGGGGAAAACC
16._SIAL_98___
CCCCAAAAAAGGAACCAAGGAAAAAACC
17._JA_9_/37_[POU]___
CCAAAAAAAAGGAACCAAGGAAAAAACC
18._SIC_628___
CCCCAAAAAAGGAACCAAGGAAAAAACC
19._SIAL_44___
CCCCAAAAAAGGAACCAAGGAAAAAAAC
20._FSC_13___
CCAAAAAAAAGGAACCAAGGAAAAAACC
21._GDL_3___
CCAAAAAAAAGGAACCAAGGAAAAAACC
22._SIC_1___
CCAAAAAAAAGGAACCAAGGGGAAAACC
23._BE_8___
CCAAAAACAAGGAACCAAGGAAAAAACC
24._EEG_8___
CCACAAAAAAGGAACCAAGGAGAAAAAC
25._NACIONAL___
CCCCAAAAAAGGAACCAAGGAAAAAAAC
26._SIC_2___
CCAAAAAAAAGGAACCAAGGGGAAAACC
27._Round_Leaf_Cacao___
CCCCAAAAAAGGAACCAAGGAAAAGGCC
28._Round_Leaf_Cacao___
CCCCAAAAAAGGAACCAAGGAAAAGGCC
29._EEG_27___
CCAAAAAAAAGGAACCAAGGAAAAAGCC
30._SIAL_169___
CCACAAAAAAGGAACCAAGGAAAAAACC
31._SIAL_505___
CCACAAAAAAGGAACCAAGGAAAAAACC
32._GU_300___
CCACAAAAAAGGAACCAAGGAAAAAACC
33._MAR_9___
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._POUND_5_/C___
CCAAAAAAAAGGAACCAAGGAAAAGGCC
35._GS_13___
CCACAAAAAAGGAACCAAGGAAAAAACC
36._CATONGO_1___
CCAAAAAAAAGGAACCAAGGAAAAGGCC
37._CATONGO_1___
CCAAAAAAAAGGAACCAAGGAAAAAAAA
38._CAS_1___
CCCCAAAAAAGGAACCAAGGGGAAAAAA
39._BE_5___
CCAAAGAAAAGGAACCAAGGAAAAAAAC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAGGAAAAGGAAAACCGGCCAAAAGG
1._BE_10___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
2._B_12_/2_[POU]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
3._SC_9_[UNK]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._AMELONADO_[VAR]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._LCT_EEN_46___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._AMELONADO_[VAR]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._SIAL_42___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._GU_207___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._SIAL_70___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._SIAL_88___
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
11._MATINA_1_/6___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._MATINA_1_/6___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._CC_37___
AGAAGGAAACGGAAAAACGGCCAAAAGG
14._SIC_7___
AGAAGGAAACGGAAAAACGGCCAAAAGG
15._N_38_[T38]___
AAAAGGAAAAGGAAAAACGGCCAAAAGG
16._SIAL_98___
AAAAAAAAAAGGAAAACCGGCCAAAAGG
17._JA_9_/37_[POU]___
GGAAGGAA__GGAAAACCGGCCAAAAGG
18._SIC_628___
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
19._SIAL_44___
AAAAAGAAACGGAAAACCAGCCAGAAGG
20._FSC_13___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
21._GDL_3___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
22._SIC_1___
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
23._BE_8___
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
24._EEG_8___
AAAAAGAAACGGAAAACCGGCCAAAAGG
25._NACIONAL___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
26._SIC_2___
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
27._Round_Leaf_Cacao___
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
28._Round_Leaf_Cacao___
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
29._EEG_27___
AGAAGGAA__GGAAAAACAGCCAAAAGG
30._SIAL_169___
AGAAGGAAAAGGAAAAACGGCCAGAAGG
31._SIAL_505___
AGAAGGAAAAGGAAAAACGGCCAGAAGG
32._GU_300___
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
33._MAR_9___
AGAAGGAAAAGGAAAACCGGCCAAAAGG
34._POUND_5_/C___
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
35._GS_13___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
36._CATONGO_1___
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
37._CATONGO_1___
AAAAGGAAAAGGAAAAACAACCGGAAGG
38._CAS_1___
AAAAGGAAAAGGAAAGCCGGCCAAACGG
39._BE_5___
AAAAGGAAACGGAAAGCCGGCCAAAAAG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGCCTTTTGGGG
1._BE_10___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
2._B_12_/2_[POU]___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
3._SC_9_[UNK]___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
4._AMELONADO_[VAR]___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
5._LCT_EEN_46___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
6._AMELONADO_[VAR]___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
7._SIAL_42___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
8._GU_207___
AATTGGAAGGAAGGGGGG__TTTTGGGG
9._SIAL_70___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
10._SIAL_88___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
11._MATINA_1_/6___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
12._MATINA_1_/6___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
13._CC_37___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
14._SIC_7___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
15._N_38_[T38]___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
16._SIAL_98___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
17._JA_9_/37_[POU]___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
18._SIC_628___
AATTGGAAGGAAGGGGGG__TTTTGGGG
19._SIAL_44___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
20._FSC_13___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
21._GDL_3___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
22._SIC_1___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
23._BE_8___
AATTGGAAGGAGGGGGGGCCTTATGGGG
24._EEG_8___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
25._NACIONAL___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
26._SIC_2___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
27._Round_Leaf_Cacao___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
28._Round_Leaf_Cacao___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
29._EEG_27___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
30._SIAL_169___
AATTGGAAGGAAGGGGGGCCTT__GGGG
31._SIAL_505___
AATTGGAAGGAAGGGGGG__TTTTGGGG
32._GU_300___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
33._MAR_9___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
34._POUND_5_/C___
AATTGGAAGGAAGGGGGGCCTTTTGGGG
35._GS_13___
AATTAGAAGGAAGGGGGGCCTTTTGGGG
36._CATONGO_1___
AATTGGAAGGAAGGGGGG__TTTTGGGG
37._CATONGO_1___
AATTGGAAGGAAGGGGGG__TTTTGGGG
38._CAS_1___
AATTGGAAGGAAGGGGGGCCTTAAGGGG
39._BE_5___
AATTGGAAGGAAGGGGGGCCTTATGGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAAAGGGGGGTTGGAACCCCGGAAAACC
1._BE_10___
AAAAGGGGGGTTGGAACCCCGGAAAACC
2._B_12_/2_[POU]___
AAAAGGGGGGTTGGAACCCCGGAAAACC
3._SC_9_[UNK]___
AAAAGGGGGGTTGGAACCCCGGAAAACC
4._AMELONADO_[VAR]___
AAAAGGGGGGTTGGAACCCCGGAAAACC
5._LCT_EEN_46___
AAAAGGGGGGTTGGAACCCCGGAAAACC
6._AMELONADO_[VAR]___
AAAAGGGGGGTTGGAACCCCGGAAAACC
7._SIAL_42___
AAAAGGGGGGTTGGAACCCCGGAAAACC
8._GU_207___
AAAAGGGGGGTTGGAACCCCGGAAAACC
9._SIAL_70___
AAAAGGGGGGTTGGGGCCCCGGAAAACC
10._SIAL_88___
AAAAGGGGGGTTGGAACCCCGGAAAACC
11._MATINA_1_/6___
AAAAGGGGGGTTGGAACCCCGGAAAACC
12._MATINA_1_/6___
AAAAGGGGGGTTGGAACCCCGGAAAACC
13._CC_37___
AAAGGGGGGGTTGGAACCCCGGAAAACC
14._SIC_7___
AAAGGGGGGGTTGGAACCCCGGAAAACC
15._N_38_[T38]___
AAAAGGGGGGATGGAACCCCGGAAAACC
16._SIAL_98___
AAAAGGGGGGTTGGAACCAAGGAAAACC
17._JA_9_/37_[POU]___
AAAAGGGGGGTTGGAACCCCGGAAAACC
18._SIC_628___
AAAAGGGGGGTTGGAACCCCGGAAAACC
19._SIAL_44___
AAAAGGGGGGTTGGAGCCCCGGAAAACG
20._FSC_13___
AAAAGGGGGGTTGGAACCCCGGAAAAGG
21._GDL_3___
AAAAGGGGGGTTGGAACCCCGGAAAAGG
22._SIC_1___
AAAAGGGGGGTTGGAACCAAGGAAAACC
23._BE_8___
AAAAGGGGGGTTGGAGCCCCGGAAAACC
24._EEG_8___
AAAGGGGGGGATGGAACCCCGGAAAACG
25._NACIONAL___
AAAAGGGGGGTTGGAACCCCGGAAAACC
26._SIC_2___
AAGGGGGGGGTTGGAACCAAGGAAAACC
27._Round_Leaf_Cacao___
AAAAGGGGGGTTGGGGCCCCGGAAAACC
28._Round_Leaf_Cacao___
AAAAGGGGGGTTGGGGCCCCGGAAAACC
29._EEG_27___
AAAAGGGGGGTTGGAACCACGGAAAACG
30._SIAL_169___
AAAGGGGGGGTTGGAGCCCCGGAAAACG
31._SIAL_505___
AAAGGGGGGGTTGGAGCCCCGGAAAACG
32._GU_300___
AAGGGGGGGGTTGGAGCCCCGGAAAACC
33._MAR_9___
AAAAGGGGGGAAGGAACCCCGGAAAAGG
34._POUND_5_/C___
AAAAGGGGGGTTGGAACCCCGGAAAACC
35._GS_13___
AAAAGGGGGGTTGGAACCCCGGAAAAGG
36._CATONGO_1___
AAAAGGGGGGTTGGAACCCCGGAAAACC
37._CATONGO_1___
AAAGGGGGGGTTGGAACCCCGGAAAACC
38._CAS_1___
AAAAGGGGGGATGGAACCCCGGAAAAGG
39._BE_5___
AAAAGGGGGGATGGAACCCCAGAAAACG
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
AAGGAAAAGGAACCGGAAAAAAAAAACC
1._BE_10___
AAGGAAAAGGAACCGGAAAAAAAAAACC
2._B_12_/2_[POU]___
AAGGAAAAGGAACCGGAAAAAAAAAACC
3._SC_9_[UNK]___
AAGGAAAAGGAACCGGAAAAAAAAAACC
4._AMELONADO_[VAR]___
AAGGAAAAGGAACCGGAAAAAAAAAACC
5._LCT_EEN_46___
AAGGAAAAGGAACCGGAAAAAAAAAACC
6._AMELONADO_[VAR]___
AAGGAAAAGGAACCGGAAAAAAAAAACC
7._SIAL_42___
AAGGAAAAGGAACCGGAAAAAAAAAACC
8._GU_207___
AAGGAAAAGGAACCGGAAAAAAAAAACC
9._SIAL_70___
ACGGAAAAGGAACCGGAAAAAAAAAACC
10._SIAL_88___
AAGGAAAAGGAACCGGAAAAAAAAAACC
11._MATINA_1_/6___
AAGGGGAAGGAACCGGAAAAAAAAAACC
12._MATINA_1_/6___
AAGGGGAAGGAACCGGAAAAAAAAAACC
13._CC_37___
ACGGAAAAGGAACCGGAAAAACAAAACC
14._SIC_7___
ACGGAAAAGGAACCGGAAAAACAAAACC
15._N_38_[T38]___
ACGGAAAAGGAACCGGAGAAAAAAAACC
16._SIAL_98___
CCGGAAAAGGAACCGGAAAAAAAAAACC
17._JA_9_/37_[POU]___
AAGGAAAAGGAACCGGAAAAAAAAAACC
18._SIC_628___
CCGGAAAAGGAACCGGAAAAAAAAAACC
19._SIAL_44___
AAGGAAAAGGAACCGGAAAAAAAAAACC
20._FSC_13___
AAGGAAAAGGAACCGGAAAAAAAAAACC
21._GDL_3___
AAGGAAAAGGAACCGGAAAAAAAAAACC
22._SIC_1___
CCGGAAAAGGAACCGGAAAAAAAAAACC
23._BE_8___
AAGGAAAAGGAACCGGAAAAACAAAACC
24._EEG_8___
AAGGAAAAAGAAACGGAAAAACAAAACC
25._NACIONAL___
AAGGGGAAGGAACCGGAAAAAAAACCCC
26._SIC_2___
ACGGAAAAGGAACCGGAAAAAAAAAACC
27._Round_Leaf_Cacao___
AAGGAAAAGGAACCGGAAAAAAAAAACC
28._Round_Leaf_Cacao___
AAGGAAAAGGAACCGGAAAAAAAAAACC
29._EEG_27___
ACGGAAAAGGAACCGGAAAAAAAAAACC
30._SIAL_169___
ACGGAAAAGGAACCGGAAAAACAAAACC
31._SIAL_505___
ACGGAAAAGGAACCGGAAAAACAAAACC
32._GU_300___
AAGGAAAAGGAACCGGAAAAACAAAACC
33._MAR_9___
AAGGGGAAGGAACCGGAAAAAAAAAACC
34._POUND_5_/C___
AAGGAAAAGGAACCGGAAAAAAAAAACC
35._GS_13___
AAAGGGAAGGAACCGGAAAAAAAACCCC
36._CATONGO_1___
AAGGAAAAGGAACCGGAAAAAAAAAACC
37._CATONGO_1___
AAGGAAAAGGAACCGGAAAAAAAAAACC
38._CAS_1___
AAGGAGAAGGAACCGGAAAAAAAAAACC
39._BE_5___
AAGGAGAAAGAACCGGAAAAAAAAAACC
 71 72 73 74 75 76 77 78 79 80 81 82   
_Input profile
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
1._BE_10___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
2._B_12_/2_[POU]___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
3._SC_9_[UNK]___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
4._AMELONADO_[VAR]___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
5._LCT_EEN_46___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
6._AMELONADO_[VAR]___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
7._SIAL_42___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
8._GU_207___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
9._SIAL_70___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
10._SIAL_88___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
11._MATINA_1_/6___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
12._MATINA_1_/6___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
13._CC_37___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
14._SIC_7___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
15._N_38_[T38]___
AGCCGGGGAAACAAGGAGAAAAGGX_XX_X
16._SIAL_98___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
17._JA_9_/37_[POU]___
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
18._SIC_628___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
19._SIAL_44___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
20._FSC_13___
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
21._GDL_3___
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
22._SIC_1___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
23._BE_8___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
24._EEG_8___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
25._NACIONAL___
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
26._SIC_2___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
27._Round_Leaf_Cacao___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
28._Round_Leaf_Cacao___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
29._EEG_27___
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
30._SIAL_169___
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
31._SIAL_505___
GGCCGGGGAACCAACGGGAAAAGGX_XX_X
32._GU_300___
GGCCGGGGAACCAAGGGGAAAAGGX_XX_X
33._MAR_9___
GGCCGGGGGGCCAAGGGGAAAAAAX_XX_X
34._POUND_5_/C___
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
35._GS_13___
GGCGGGGGAACCAAGGGGAAAAAAX_XX_X
36._CATONGO_1___
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
37._CATONGO_1___
GGCCGGGGAACCAACCGGAAAAGGX_XX_X
38._CAS_1___
GGCGGGGGGGCCGGGGGGAAAAGGX_XX_X
39._BE_5___
GGCCGGGGAGCCAAGGGGAAAAGGX_XX_X

Input profile: UF_273 MITC-000717

 
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USDA-SHRS, United States of America
 Mars, 2018

1._BE_10 GC-08-90-2-13

identical
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

2._B_12_/2_[POU] RUQ_436

identical
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._SC_9_[UNK] RUQ_44

identical
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._AMELONADO_[VAR] MITC-000366

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

5._LCT_EEN_46 MITC-000412

identical
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

6._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

identical
82 shared markers

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USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

7._SIAL_42 SIAL_42_Fld#_146_Plt#_6

identical
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

8._GU_207 GC-01-56-3-11

identical
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

9._SIAL_70 GC-01-39-2-16

97.6 %
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

10._SIAL_88 GC-01-52-3-7

97 %
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._MATINA_1_/6 RUQ_1715

96.3 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

12._MATINA_1_/6 MITC-000114

96.3 %
82 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

13._CC_37 CC_37_Fld#_69B_Plt#_4

96.3 %
82 shared markers

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USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

14._SIC_7 SIC_7_Fld#_68_Plt#_6

96.3 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

15._N_38_[T38] RUQ_1159

95.1 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

16._SIAL_98 SIAL_98_Fld#_84_Plt#_5

95.1 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

17._JA_9_/37_[POU] GC-08-71-1-93

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._SIC_628 GC-06-15-1-15

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._SIAL_44 SIAL_44_Fld#_66_Plt#_5

94.5 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

20._FSC_13 RUQ_1535

93.9 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

21._GDL_3 RUQ_553

93.9 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._SIC_1 SIC_1_Fld#_51_Plt#_5

93.9 %
82 shared markers

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USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

23._BE_8 RUQ_1694

93.3 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._EEG_8 RUQ_1726

93.3 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

25._NACIONAL NACIONAL_Fld#_189_Plt#_5

93.3 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

26._SIC_2 SIC_2_Fld#_120_Plt#_6

93.3 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

27._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

92.7 %
82 shared markers

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USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

28._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

92.7 %
82 shared markers

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USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

29._EEG_27 GC-08-254-8-22

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

30._SIAL_169 GC-01-41-2-18

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

31._SIAL_505 GC-01-48-3-3

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

32._GU_300 GC-08-63-1-85

92.1 %
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

33._MAR_9 RUQ_557

92.1 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._POUND_5_/C GC-01-118-6-15

91.5 %
82 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

35._GS_13 RUQ_683

91.5 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

36._CATONGO_1 GC-08-109-3-8

91.4 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

37._CATONGO_1 GC-08-277-8-49

91.4 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

38._CAS_1 CAS_1_Fld#_54_Plt#_6

90.9 %
82 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 54, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

39._BE_5 RUQ_1719

90.2 %
82 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998