SNP Profiles matching SIAL 98

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCCCAAAAAAGGAACCAAGGGGAAAACC
1._BE_10___
CCCCAAAAAAGGAACCAAGGGGAAAACC
2._B_12_/2_[POU]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
3._SC_9_[UNK]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
4._AMELONADO_[VAR]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
5._LCT_EEN_46___
CCCCAAAAAAGGAACCAAGGGGAAAACC
6._UF_273___
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._AMELONADO_[VAR]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
8._SIAL_42___
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._SIAL_70___
CCCCAAAAAAGGAACCAAGGAGAAAACC
10._SIAL_88___
CCCCAAAAAAGGAACCAAGGAAAAAACC
11._MATINA_1_/6___
CCAAAAAAAAGGAACCAAGGAAAAAACC
12._MATINA_1_/6___
CCAAAAAAAAGGAACCAAGGAAAAAACC
13._CC_37___
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIC_7___
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._SIC_628___
CCCCAAAAAAGGAACCAAGGAAAAAACC
16._N_38_[T38]___
CCCCAAAAAAGGAAACAAGGGGAAAACC
17._SIAL_98___
CCCCAAAAAAGGAACCAAGGAAAAAACC
18._JA_9_/37_[POU]___
CCAAAAAAAAGGAACCAAGGAAAAAACC
19._SIAL_44___
CCCCAAAAAAGGAACCAAGGAAAAAAAC
20._FSC_13___
CCAAAAAAAAGGAACCAAGGAAAAAACC
21._GDL_3___
CCAAAAAAAAGGAACCAAGGAAAAAACC
22._SIC_1___
CCAAAAAAAAGGAACCAAGGGGAAAACC
23._BE_8___
CCAAAAACAAGGAACCAAGGAAAAAACC
24._EEG_8___
CCACAAAAAAGGAACCAAGGAGAAAAAC
25._NACIONAL___
CCCCAAAAAAGGAACCAAGGAAAAAAAC
26._SIC_2___
CCAAAAAAAAGGAACCAAGGGGAAAACC
27._SIAL_505___
CCACAAAAAAGGAACCAAGGAAAAAACC
28._Round_Leaf_Cacao___
CCCCAAAAAAGGAACCAAGGAAAAGGCC
29._Round_Leaf_Cacao___
CCCCAAAAAAGGAACCAAGGAAAAGGCC
30._EEG_27___
CCAAAAAAAAGGAACCAAGGAAAAAGCC
31._SIAL_169___
CCACAAAAAAGGAACCAAGGAAAAAACC
32._GU_300___
CCACAAAAAAGGAACCAAGGAAAAAACC
33._MAR_9___
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._CATONGO_1___
CCAAAAAAAAGGAACCAAGGAAAAGGCC
35._CATONGO_1___
CCAAAAAAAAGGAACCAAGGAAAAAAAA
36._POUND_5_/C___
CCAAAAAAAAGGAACCAAGGAAAAGGCC
37._GS_13___
CCACAAAAAAGGAACCAAGGAAAAAACC
38._CAS_1___
CCCCAAAAAAGGAACCAAGGGGAAAAAA
39._BE_5___
CCAAAGAAAAGGAACCAAGGAAAAAAAC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAAAGGAAAAGGAAAACCGGCCAAAAGG
1._BE_10___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
2._B_12_/2_[POU]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
3._SC_9_[UNK]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
4._AMELONADO_[VAR]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
5._LCT_EEN_46___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
6._UF_273___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
7._AMELONADO_[VAR]___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
8._SIAL_42___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
9._SIAL_70___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
10._SIAL_88___
AGAAGGAAAAGGAAAAAAGGCCAAAAGG
11._MATINA_1_/6___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
12._MATINA_1_/6___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
13._CC_37___
AGAAGGAAACGGAAAAACGGCCAAAAGG
14._SIC_7___
AGAAGGAAACGGAAAAACGGCCAAAAGG
15._SIC_628___
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
16._N_38_[T38]___
AAAAGGAAAAGGAAAAACGGCCAAAAGG
17._SIAL_98___
AAAAAAAAAAGGAAAACCGGCCAAAAGG
18._JA_9_/37_[POU]___
GGAAGGAA__GGAAAACCGGCCAAAAGG
19._SIAL_44___
AAAAAGAAACGGAAAACCAGCCAGAAGG
20._FSC_13___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
21._GDL_3___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
22._SIC_1___
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
23._BE_8___
AAAAGGAAAAGGAAAGCCGGCCAAAAAG
24._EEG_8___
AAAAAGAAACGGAAAACCGGCCAAAAGG
25._NACIONAL___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
26._SIC_2___
GGAAGGAAAAGGAAAAAAGGCCAAAAGG
27._SIAL_505___
AGAAGGAAAAGGAAAAACGGCCAGAAGG
28._Round_Leaf_Cacao___
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
29._Round_Leaf_Cacao___
AAAAAAAAAAGGAAAAAAGGCCGGAAGG
30._EEG_27___
AGAAGGAA__GGAAAAACAGCCAAAAGG
31._SIAL_169___
AGAAGGAAAAGGAAAAACGGCCAGAAGG
32._GU_300___
GGAAGGAAAAGGAAAAAAAGCCAGAAGG
33._MAR_9___
AGAAGGAAAAGGAAAACCGGCCAAAAGG
34._CATONGO_1___
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
35._CATONGO_1___
AAAAGGAAAAGGAAAAACAACCGGAAGG
36._POUND_5_/C___
GGAAGGAAAAGGAAAAAAGGCCGGAAGG
37._GS_13___
AAAAGGAAAAGGAAAACCGGCCAAAAGG
38._CAS_1___
AAAAGGAAAAGGAAAGCCGGCCAAACGG
39._BE_5___
AAAAGGAAACGGAAAGCCGGCCAAAAAG
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGGAAGGAAGGGGGGTTTTGGGGAA
1._BE_10___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
2._B_12_/2_[POU]___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
3._SC_9_[UNK]___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
4._AMELONADO_[VAR]___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
5._LCT_EEN_46___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
6._UF_273___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
7._AMELONADO_[VAR]___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
8._SIAL_42___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
9._SIAL_70___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
10._SIAL_88___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
11._MATINA_1_/6___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
12._MATINA_1_/6___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
13._CC_37___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
14._SIC_7___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
15._SIC_628___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
16._N_38_[T38]___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
17._SIAL_98___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
18._JA_9_/37_[POU]___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
19._SIAL_44___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
20._FSC_13___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
21._GDL_3___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
22._SIC_1___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
23._BE_8___
AATTGGAAGGAGGGGGGGTTATGGGGAA
24._EEG_8___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
25._NACIONAL___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
26._SIC_2___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
27._SIAL_505___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
28._Round_Leaf_Cacao___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
29._Round_Leaf_Cacao___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
30._EEG_27___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
31._SIAL_169___
AATTGGAAGGAAGGGGGGTT__GGGGAA
32._GU_300___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
33._MAR_9___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
34._CATONGO_1___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
35._CATONGO_1___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
36._POUND_5_/C___
AATTGGAAGGAAGGGGGGTTTTGGGGAA
37._GS_13___
AATTAGAAGGAAGGGGGGTTTTGGGGAA
38._CAS_1___
AATTGGAAGGAAGGGGGGTTAAGGGGAA
39._BE_5___
AATTGGAAGGAAGGGGGGTTATGGGGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAGGGGGGTTGGAACCCCGGAAAACCAA
1._BE_10___
AAGGGGGGTTGGAACCCCGGAAAACCAA
2._B_12_/2_[POU]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
3._SC_9_[UNK]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
4._AMELONADO_[VAR]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
5._LCT_EEN_46___
AAGGGGGGTTGGAACCCCGGAAAACCAA
6._UF_273___
AAGGGGGGTTGGAACCCCGGAAAACCAA
7._AMELONADO_[VAR]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
8._SIAL_42___
AAGGGGGGTTGGAACCCCGGAAAACCAA
9._SIAL_70___
AAGGGGGGTTGGGGCCCCGGAAAACCAC
10._SIAL_88___
AAGGGGGGTTGGAACCCCGGAAAACCAA
11._MATINA_1_/6___
AAGGGGGGTTGGAACCCCGGAAAACCAA
12._MATINA_1_/6___
AAGGGGGGTTGGAACCCCGGAAAACCAA
13._CC_37___
AGGGGGGGTTGGAACCCCGGAAAACCAC
14._SIC_7___
AGGGGGGGTTGGAACCCCGGAAAACCAC
15._SIC_628___
AAGGGGGGTTGGAACCCCGGAAAACCCC
16._N_38_[T38]___
AAGGGGGGATGGAACCCCGGAAAACCAC
17._SIAL_98___
AAGGGGGGTTGGAACCAAGGAAAACCCC
18._JA_9_/37_[POU]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
19._SIAL_44___
AAGGGGGGTTGGAGCCCCGGAAAACGAA
20._FSC_13___
AAGGGGGGTTGGAACCCCGGAAAAGGAA
21._GDL_3___
AAGGGGGGTTGGAACCCCGGAAAAGGAA
22._SIC_1___
AAGGGGGGTTGGAACCAAGGAAAACCCC
23._BE_8___
AAGGGGGGTTGGAGCCCCGGAAAACCAA
24._EEG_8___
AGGGGGGGATGGAACCCCGGAAAACGAA
25._NACIONAL___
AAGGGGGGTTGGAACCCCGGAAAACCAA
26._SIC_2___
GGGGGGGGTTGGAACCAAGGAAAACCAC
27._SIAL_505___
AGGGGGGGTTGGAGCCCCGGAAAACGAC
28._Round_Leaf_Cacao___
AAGGGGGGTTGGGGCCCCGGAAAACCAA
29._Round_Leaf_Cacao___
AAGGGGGGTTGGGGCCCCGGAAAACCAA
30._EEG_27___
AAGGGGGGTTGGAACCACGGAAAACGAC
31._SIAL_169___
AGGGGGGGTTGGAGCCCCGGAAAACGAC
32._GU_300___
GGGGGGGGTTGGAGCCCCGGAAAACCAA
33._MAR_9___
AAGGGGGGAAGGAACCCCGGAAAAGGAA
34._CATONGO_1___
AAGGGGGGTTGGAACCCCGGAAAACCAA
35._CATONGO_1___
AGGGGGGGTTGGAACCCCGGAAAACCAA
36._POUND_5_/C___
AAGGGGGGTTGGAACCCCGGAAAACCAA
37._GS_13___
AAGGGGGGTTGGAACCCCGGAAAAGGAA
38._CAS_1___
AAGGGGGGATGGAACCCCGGAAAAGGAA
39._BE_5___
AAGGGGGGATGGAACCCCAGAAAACGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGAAAAGGAACCGGAAAAAAAAAACCGG
1._BE_10___
GGAAAAGGAACCGGAAAAAAAAAACCGG
2._B_12_/2_[POU]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
3._SC_9_[UNK]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
4._AMELONADO_[VAR]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
5._LCT_EEN_46___
GGAAAAGGAACCGGAAAAAAAAAACCGG
6._UF_273___
GGAAAAGGAACCGGAAAAAAAAAACCGG
7._AMELONADO_[VAR]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
8._SIAL_42___
GGAAAAGGAACCGGAAAAAAAAAACCGG
9._SIAL_70___
GGAAAAGGAACCGGAAAAAAAAAACCGG
10._SIAL_88___
GGAAAAGGAACCGGAAAAAAAAAACCGG
11._MATINA_1_/6___
GGGGAAGGAACCGGAAAAAAAAAACCGG
12._MATINA_1_/6___
GGGGAAGGAACCGGAAAAAAAAAACCGG
13._CC_37___
GGAAAAGGAACCGGAAAAACAAAACCGG
14._SIC_7___
GGAAAAGGAACCGGAAAAACAAAACCGG
15._SIC_628___
GGAAAAGGAACCGGAAAAAAAAAACCGG
16._N_38_[T38]___
GGAAAAGGAACCGGAGAAAAAAAACCAG
17._SIAL_98___
GGAAAAGGAACCGGAAAAAAAAAACCGG
18._JA_9_/37_[POU]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
19._SIAL_44___
GGAAAAGGAACCGGAAAAAAAAAACCGG
20._FSC_13___
GGAAAAGGAACCGGAAAAAAAAAACCGG
21._GDL_3___
GGAAAAGGAACCGGAAAAAAAAAACCGG
22._SIC_1___
GGAAAAGGAACCGGAAAAAAAAAACCGG
23._BE_8___
GGAAAAGGAACCGGAAAAACAAAACCGG
24._EEG_8___
GGAAAAAGAAACGGAAAAACAAAACCGG
25._NACIONAL___
GGGGAAGGAACCGGAAAAAAAACCCCGG
26._SIC_2___
GGAAAAGGAACCGGAAAAAAAAAACCGG
27._SIAL_505___
GGAAAAGGAACCGGAAAAACAAAACCGG
28._Round_Leaf_Cacao___
GGAAAAGGAACCGGAAAAAAAAAACCGG
29._Round_Leaf_Cacao___
GGAAAAGGAACCGGAAAAAAAAAACCGG
30._EEG_27___
GGAAAAGGAACCGGAAAAAAAAAACCGG
31._SIAL_169___
GGAAAAGGAACCGGAAAAACAAAACCGG
32._GU_300___
GGAAAAGGAACCGGAAAAACAAAACCGG
33._MAR_9___
GGGGAAGGAACCGGAAAAAAAAAACCGG
34._CATONGO_1___
GGAAAAGGAACCGGAAAAAAAAAACCGG
35._CATONGO_1___
GGAAAAGGAACCGGAAAAAAAAAACCGG
36._POUND_5_/C___
GGAAAAGGAACCGGAAAAAAAAAACCGG
37._GS_13___
AGGGAAGGAACCGGAAAAAAAACCCCGG
38._CAS_1___
GGAGAAGGAACCGGAAAAAAAAAACCGG
39._BE_5___
GGAGAAAGAACCGGAAAAAAAAAACCGG
 71 72 73 74 75 76 77 78 79 80 81    
_Input profile
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
1._BE_10___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
2._B_12_/2_[POU]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
3._SC_9_[UNK]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
4._AMELONADO_[VAR]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
5._LCT_EEN_46___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
6._UF_273___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
7._AMELONADO_[VAR]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
8._SIAL_42___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
9._SIAL_70___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
10._SIAL_88___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
11._MATINA_1_/6___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
12._MATINA_1_/6___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
13._CC_37___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
14._SIC_7___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
15._SIC_628___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
16._N_38_[T38]___
CCGGGGAAACAAGGAGAAAAGGX_XX_XX_X
17._SIAL_98___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
18._JA_9_/37_[POU]___
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
19._SIAL_44___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
20._FSC_13___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
21._GDL_3___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
22._SIC_1___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
23._BE_8___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
24._EEG_8___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
25._NACIONAL___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
26._SIC_2___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
27._SIAL_505___
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
28._Round_Leaf_Cacao___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
29._Round_Leaf_Cacao___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
30._EEG_27___
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
31._SIAL_169___
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
32._GU_300___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
33._MAR_9___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
34._CATONGO_1___
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
35._CATONGO_1___
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
36._POUND_5_/C___
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
37._GS_13___
CGGGGGAACCAAGGGGAAAAAAX_XX_XX_X
38._CAS_1___
CGGGGGGGCCGGGGGGAAAAGGX_XX_XX_X
39._BE_5___
CCGGGGAGCCAAGGGGAAAAGGX_XX_XX_X

Input profile: GU_207 GC-01-56-3-11

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

1._BE_10 GC-08-90-2-13

identical
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

2._B_12_/2_[POU] RUQ_436

identical
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._SC_9_[UNK] RUQ_44

identical
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

4._AMELONADO_[VAR] MITC-000366

identical
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

5._LCT_EEN_46 MITC-000412

identical
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

6._UF_273 MITC-000717

identical
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

7._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

identical
81 shared markers

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USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

8._SIAL_42 SIAL_42_Fld#_146_Plt#_6

identical
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

9._SIAL_70 GC-01-39-2-16

97.5 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

10._SIAL_88 GC-01-52-3-7

96.9 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

11._MATINA_1_/6 RUQ_1715

96.3 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

12._MATINA_1_/6 MITC-000114

96.3 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

13._CC_37 CC_37_Fld#_69B_Plt#_4

96.3 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

14._SIC_7 SIC_7_Fld#_68_Plt#_6

96.3 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

15._SIC_628 GC-06-15-1-15

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._N_38_[T38] RUQ_1159

95.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

17._SIAL_98 SIAL_98_Fld#_84_Plt#_5

95.1 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

18._JA_9_/37_[POU] GC-08-71-1-93

95 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

19._SIAL_44 SIAL_44_Fld#_66_Plt#_5

94.4 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

20._FSC_13 RUQ_1535

93.8 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

21._GDL_3 RUQ_553

93.8 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

22._SIC_1 SIC_1_Fld#_51_Plt#_5

93.8 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

23._BE_8 RUQ_1694

93.2 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

24._EEG_8 RUQ_1726

93.2 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

25._NACIONAL NACIONAL_Fld#_189_Plt#_5

93.2 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

26._SIC_2 SIC_2_Fld#_120_Plt#_6

93.2 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

27._SIAL_505 GC-01-48-3-3

92.6 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

28._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

92.6 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

29._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

92.6 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

30._EEG_27 GC-08-254-8-22

92.5 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

31._SIAL_169 GC-01-41-2-18

92.5 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

32._GU_300 GC-08-63-1-85

92 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

33._MAR_9 RUQ_557

92 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._CATONGO_1 GC-08-109-3-8

91.4 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

35._CATONGO_1 GC-08-277-8-49

91.4 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

36._POUND_5_/C GC-01-118-6-15

91.4 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

37._GS_13 RUQ_683

91.4 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

38._CAS_1 CAS_1_Fld#_54_Plt#_6

90.7 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 54, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

39._BE_5 RUQ_1719

90.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP316 39TcSNP32 40TcSNP329
41TcSNP364 42TcSNP372 43TcSNP413 44TcSNP418 45TcSNP42
46TcSNP429 47TcSNP430 48TcSNP448 49TcSNP497 50TcSNP521
51TcSNP529 52TcSNP547 53TcSNP560 54TcSNP561 55TcSNP577
56TcSNP591 57TcSNP60 58TcSNP602 59TcSNP619 60TcSNP653
61TcSNP689 62TcSNP723 63TcSNP731 64TcSNP75 65TcSNP751
66TcSNP776 67TcSNP799 68TcSNP823 69TcSNP836 70TcSNP860
71TcSNP872 72TcSNP891 73TcSNP894 74TcSNP899 75TcSNP90
76TcSNP917 77TcSNP929 78TcSNP944 79TcSNP953 80TcSNP994
81TcSNP998