SNP Profiles matching SIAL 98

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAAAAAAAAGGAACCAAGGAAAAAACC
1._POUND_5_/C___
CCAAAAAAAAGGAACCAAGGAAAAGGCC
2._MATINA_1_/6___
CCAAAAAAAAGGAACCAAGGAAAAAACC
3._MATINA_1_/6___
CCAAAAAAAAGGAACCAAGGAAAAAACC
4._CATONGO_1___
CCAAAAAAAAGGAACCAAGGAAAAGGCC
5._SIAL_88___
CCCCAAAAAAGGAACCAAGGAAAAAACC
6._BE_10___
CCCCAAAAAAGGAACCAAGGGGAAAACC
7._EEG_27___
CCAAAAAAAAGGAACCAAGGAAAAAGCC
8._B_12_/2_[POU]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
9._SC_9_[UNK]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
10._AMELONADO_[VAR]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
11._LCT_EEN_46___
CCCCAAAAAAGGAACCAAGGGGAAAACC
12._UF_273___
CCCCAAAAAAGGAACCAAGGGGAAAACC
13._AMELONADO_[VAR]___
CCCCAAAAAAGGAACCAAGGGGAAAACC
14._SIAL_42___
CCCCAAAAAAGGAACCAAGGGGAAAACC
15._GU_207___
CCCCAAAAAAGGAACCAAGGGGAAAACC
16._SIC_628___
CCCCAAAAAAGGAACCAAGGAAAAAACC
17._SIAL_70___
CCCCAAAAAAGGAACCAAGGAGAAAACC
18._FSC_13___
CCAAAAAAAAGGAACCAAGGAAAAAACC
19._GDL_3___
CCAAAAAAAAGGAACCAAGGAAAAAACC
20._SIC_1___
CCAAAAAAAAGGAACCAAGGGGAAAACC
21._CATONGO_1___
CCAAAAAAAAGGAACCAAGGAAAAAAAA
22._SIAL_169___
CCACAAAAAAGGAACCAAGGAAAAAACC
23._SIAL_505___
CCACAAAAAAGGAACCAAGGAAAAAACC
24._GU_300___
CCACAAAAAAGGAACCAAGGAAAAAACC
25._BE_8___
CCAAAAACAAGGAACCAAGGAAAAAACC
26._CC_37___
CCCCAAAAAAGGAACCAAGGGGAAAACC
27._SIC_2___
CCAAAAAAAAGGAACCAAGGGGAAAACC
28._SIC_7___
CCCCAAAAAAGGAACCAAGGGGAAAACC
29._SIAL_44___
CCCCAAAAAAGGAACCAAGGAAAAAAAC
30._SIAL_98___
CCCCAAAAAAGGAACCAAGGAAAAAACC
31._EEG_8___
CCACAAAAAAGGAACCAAGGAGAAAAAC
32._BE_5___
CCAAAGAAAAGGAACCAAGGAAAAAAAC
33._MAR_9___
CCCCAAAAAAGGAACCAAGGAAAAAACC
34._NACIONAL___
CCCCAAAAAAGGAACCAAGGAAAAAAAC
35._GS_13___
CCACAAAAAAGGAACCAAGGAAAAAACC
36._N_38_[T38]___
CCCCAAAAAAGGAAACAAGGGGAAAACC
37._Round_Leaf_Cacao___
CCCCAAAAAAGGAACCAAGGAAAAGGCC
38._Round_Leaf_Cacao___
CCCCAAAAAAGGAACCAAGGAAAAGGCC
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGAAGGAAGGAAAACCGGCCAAAAGGAA
1._POUND_5_/C___
GGAAGGAAGGAAAAAAGGCCGGAAGGAA
2._MATINA_1_/6___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
3._MATINA_1_/6___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
4._CATONGO_1___
GGAAGGAAGGAAAAAAGGCCGGAAGGAA
5._SIAL_88___
AGAAGGAAGGAAAAAAGGCCAAAAGGAA
6._BE_10___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
7._EEG_27___
AGAAGGAAGGAAAAACAGCCAAAAGGAA
8._B_12_/2_[POU]___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
9._SC_9_[UNK]___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
10._AMELONADO_[VAR]___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
11._LCT_EEN_46___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
12._UF_273___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
13._AMELONADO_[VAR]___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
14._SIAL_42___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
15._GU_207___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
16._SIC_628___
GGAAGGAAGGAAAAAAGGCCAAAAGGAA
17._SIAL_70___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
18._FSC_13___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
19._GDL_3___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
20._SIC_1___
GGAAGGAAGGAAAAAAGGCCAAAAGGAA
21._CATONGO_1___
AAAAGGAAGGAAAAACAACCGGAAGGAA
22._SIAL_169___
AGAAGGAAGGAAAAACGGCCAGAAGGAA
23._SIAL_505___
AGAAGGAAGGAAAAACGGCCAGAAGGAA
24._GU_300___
GGAAGGAAGGAAAAAAAGCCAGAAGGAA
25._BE_8___
AAAAGGAAGGAAAGCCGGCCAAAAAGAA
26._CC_37___
AGAAGGAAGGAAAAACGGCCAAAAGGAA
27._SIC_2___
GGAAGGAAGGAAAAAAGGCCAAAAGGAA
28._SIC_7___
AGAAGGAAGGAAAAACGGCCAAAAGGAA
29._SIAL_44___
AAAAAGAAGGAAAACCAGCCAGAAGGAA
30._SIAL_98___
AAAAAAAAGGAAAACCGGCCAAAAGGAA
31._EEG_8___
AAAAAGAAGGAAAACCGGCCAAAAGGAA
32._BE_5___
AAAAGGAAGGAAAGCCGGCCAAAAAGAA
33._MAR_9___
AGAAGGAAGGAAAACCGGCCAAAAGGAA
34._NACIONAL___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
35._GS_13___
AAAAGGAAGGAAAACCGGCCAAAAGGAA
36._N_38_[T38]___
AAAAGGAAGGAAAAACGGCCAAAAGGAA
37._Round_Leaf_Cacao___
AAAAAAAAGGAAAAAAGGCCGGAAGGAA
38._Round_Leaf_Cacao___
AAAAAAAAGGAAAAAAGGCCGGAAGGAA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
1._POUND_5_/C___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
2._MATINA_1_/6___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
3._MATINA_1_/6___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
4._CATONGO_1___
TTGGAAGGAAGGGGGG__TTTTGGGGAA
5._SIAL_88___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
6._BE_10___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
7._EEG_27___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
8._B_12_/2_[POU]___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
9._SC_9_[UNK]___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
10._AMELONADO_[VAR]___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
11._LCT_EEN_46___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
12._UF_273___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
13._AMELONADO_[VAR]___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
14._SIAL_42___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
15._GU_207___
TTGGAAGGAAGGGGGG__TTTTGGGGAA
16._SIC_628___
TTGGAAGGAAGGGGGG__TTTTGGGGAA
17._SIAL_70___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
18._FSC_13___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
19._GDL_3___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
20._SIC_1___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
21._CATONGO_1___
TTGGAAGGAAGGGGGG__TTTTGGGGAA
22._SIAL_169___
TTGGAAGGAAGGGGGGCCTT__GGGGAA
23._SIAL_505___
TTGGAAGGAAGGGGGG__TTTTGGGGAA
24._GU_300___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
25._BE_8___
TTGGAAGGAGGGGGGGCCTTATGGGGAA
26._CC_37___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
27._SIC_2___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
28._SIC_7___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
29._SIAL_44___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
30._SIAL_98___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
31._EEG_8___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
32._BE_5___
TTGGAAGGAAGGGGGGCCTTATGGGGAA
33._MAR_9___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
34._NACIONAL___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
35._GS_13___
TTAGAAGGAAGGGGGGCCTTTTGGGGAA
36._N_38_[T38]___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
37._Round_Leaf_Cacao___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
38._Round_Leaf_Cacao___
TTGGAAGGAAGGGGGGCCTTTTGGGGAA
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AAGGGGGGTTGGAACCCCGGAAAACCAA
1._POUND_5_/C___
AAGGGGGGTTGGAACCCCGGAAAACCAA
2._MATINA_1_/6___
AAGGGGGGTTGGAACCCCGGAAAACCAA
3._MATINA_1_/6___
AAGGGGGGTTGGAACCCCGGAAAACCAA
4._CATONGO_1___
AAGGGGGGTTGGAACCCCGGAAAACCAA
5._SIAL_88___
AAGGGGGGTTGGAACCCCGGAAAACCAA
6._BE_10___
AAGGGGGGTTGGAACCCCGGAAAACCAA
7._EEG_27___
AAGGGGGGTTGGAACCACGGAAAACGAC
8._B_12_/2_[POU]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
9._SC_9_[UNK]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
10._AMELONADO_[VAR]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
11._LCT_EEN_46___
AAGGGGGGTTGGAACCCCGGAAAACCAA
12._UF_273___
AAGGGGGGTTGGAACCCCGGAAAACCAA
13._AMELONADO_[VAR]___
AAGGGGGGTTGGAACCCCGGAAAACCAA
14._SIAL_42___
AAGGGGGGTTGGAACCCCGGAAAACCAA
15._GU_207___
AAGGGGGGTTGGAACCCCGGAAAACCAA
16._SIC_628___
AAGGGGGGTTGGAACCCCGGAAAACCCC
17._SIAL_70___
AAGGGGGGTTGGGGCCCCGGAAAACCAC
18._FSC_13___
AAGGGGGGTTGGAACCCCGGAAAAGGAA
19._GDL_3___
AAGGGGGGTTGGAACCCCGGAAAAGGAA
20._SIC_1___
AAGGGGGGTTGGAACCAAGGAAAACCCC
21._CATONGO_1___
AGGGGGGGTTGGAACCCCGGAAAACCAA
22._SIAL_169___
AGGGGGGGTTGGAGCCCCGGAAAACGAC
23._SIAL_505___
AGGGGGGGTTGGAGCCCCGGAAAACGAC
24._GU_300___
GGGGGGGGTTGGAGCCCCGGAAAACCAA
25._BE_8___
AAGGGGGGTTGGAGCCCCGGAAAACCAA
26._CC_37___
AGGGGGGGTTGGAACCCCGGAAAACCAC
27._SIC_2___
GGGGGGGGTTGGAACCAAGGAAAACCAC
28._SIC_7___
AGGGGGGGTTGGAACCCCGGAAAACCAC
29._SIAL_44___
AAGGGGGGTTGGAGCCCCGGAAAACGAA
30._SIAL_98___
AAGGGGGGTTGGAACCAAGGAAAACCCC
31._EEG_8___
AGGGGGGGATGGAACCCCGGAAAACGAA
32._BE_5___
AAGGGGGGATGGAACCCCAGAAAACGAA
33._MAR_9___
AAGGGGGGAAGGAACCCCGGAAAAGGAA
34._NACIONAL___
AAGGGGGGTTGGAACCCCGGAAAACCAA
35._GS_13___
AAGGGGGGTTGGAACCCCGGAAAAGGAA
36._N_38_[T38]___
AAGGGGGGATGGAACCCCGGAAAACCAC
37._Round_Leaf_Cacao___
AAGGGGGGTTGGGGCCCCGGAAAACCAA
38._Round_Leaf_Cacao___
AAGGGGGGTTGGGGCCCCGGAAAACCAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
GGAAAAGGAACCGGAAAAAAAAAACCGG
1._POUND_5_/C___
GGAAAAGGAACCGGAAAAAAAAAACCGG
2._MATINA_1_/6___
GGGGAAGGAACCGGAAAAAAAAAACCGG
3._MATINA_1_/6___
GGGGAAGGAACCGGAAAAAAAAAACCGG
4._CATONGO_1___
GGAAAAGGAACCGGAAAAAAAAAACCGG
5._SIAL_88___
GGAAAAGGAACCGGAAAAAAAAAACCGG
6._BE_10___
GGAAAAGGAACCGGAAAAAAAAAACCGG
7._EEG_27___
GGAAAAGGAACCGGAAAAAAAAAACCGG
8._B_12_/2_[POU]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
9._SC_9_[UNK]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
10._AMELONADO_[VAR]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
11._LCT_EEN_46___
GGAAAAGGAACCGGAAAAAAAAAACCGG
12._UF_273___
GGAAAAGGAACCGGAAAAAAAAAACCGG
13._AMELONADO_[VAR]___
GGAAAAGGAACCGGAAAAAAAAAACCGG
14._SIAL_42___
GGAAAAGGAACCGGAAAAAAAAAACCGG
15._GU_207___
GGAAAAGGAACCGGAAAAAAAAAACCGG
16._SIC_628___
GGAAAAGGAACCGGAAAAAAAAAACCGG
17._SIAL_70___
GGAAAAGGAACCGGAAAAAAAAAACCGG
18._FSC_13___
GGAAAAGGAACCGGAAAAAAAAAACCGG
19._GDL_3___
GGAAAAGGAACCGGAAAAAAAAAACCGG
20._SIC_1___
GGAAAAGGAACCGGAAAAAAAAAACCGG
21._CATONGO_1___
GGAAAAGGAACCGGAAAAAAAAAACCGG
22._SIAL_169___
GGAAAAGGAACCGGAAAAACAAAACCGG
23._SIAL_505___
GGAAAAGGAACCGGAAAAACAAAACCGG
24._GU_300___
GGAAAAGGAACCGGAAAAACAAAACCGG
25._BE_8___
GGAAAAGGAACCGGAAAAACAAAACCGG
26._CC_37___
GGAAAAGGAACCGGAAAAACAAAACCGG
27._SIC_2___
GGAAAAGGAACCGGAAAAAAAAAACCGG
28._SIC_7___
GGAAAAGGAACCGGAAAAACAAAACCGG
29._SIAL_44___
GGAAAAGGAACCGGAAAAAAAAAACCGG
30._SIAL_98___
GGAAAAGGAACCGGAAAAAAAAAACCGG
31._EEG_8___
GGAAAAAGAAACGGAAAAACAAAACCGG
32._BE_5___
GGAGAAAGAACCGGAAAAAAAAAACCGG
33._MAR_9___
GGGGAAGGAACCGGAAAAAAAAAACCGG
34._NACIONAL___
GGGGAAGGAACCGGAAAAAAAACCCCGG
35._GS_13___
AGGGAAGGAACCGGAAAAAAAACCCCGG
36._N_38_[T38]___
GGAAAAGGAACCGGAGAAAAAAAACCAG
37._Round_Leaf_Cacao___
GGAAAAGGAACCGGAAAAAAAAAACCGG
38._Round_Leaf_Cacao___
GGAAAAGGAACCGGAAAAAAAAAACCGG
 71 72 73 74 75 76 77 78 79 80 81    
_Input profile
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
1._POUND_5_/C___
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
2._MATINA_1_/6___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
3._MATINA_1_/6___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
4._CATONGO_1___
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
5._SIAL_88___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
6._BE_10___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
7._EEG_27___
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
8._B_12_/2_[POU]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
9._SC_9_[UNK]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
10._AMELONADO_[VAR]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
11._LCT_EEN_46___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
12._UF_273___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
13._AMELONADO_[VAR]___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
14._SIAL_42___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
15._GU_207___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
16._SIC_628___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
17._SIAL_70___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
18._FSC_13___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
19._GDL_3___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
20._SIC_1___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
21._CATONGO_1___
CCGGGGAACCAACCGGAAAAGGX_XX_XX_X
22._SIAL_169___
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
23._SIAL_505___
CCGGGGAACCAACGGGAAAAGGX_XX_XX_X
24._GU_300___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
25._BE_8___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
26._CC_37___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
27._SIC_2___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
28._SIC_7___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
29._SIAL_44___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
30._SIAL_98___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
31._EEG_8___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
32._BE_5___
CCGGGGAGCCAAGGGGAAAAGGX_XX_XX_X
33._MAR_9___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
34._NACIONAL___
CCGGGGGGCCAAGGGGAAAAAAX_XX_XX_X
35._GS_13___
CGGGGGAACCAAGGGGAAAAAAX_XX_XX_X
36._N_38_[T38]___
CCGGGGAAACAAGGAGAAAAGGX_XX_XX_X
37._Round_Leaf_Cacao___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X
38._Round_Leaf_Cacao___
CCGGGGAACCAAGGGGAAAAGGX_XX_XX_X

Input profile: JA_9_/37_[POU] GC-08-71-1-93

 
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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 93, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

1._POUND_5_/C GC-01-118-6-15

96.3 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 6, Rep: 15, Tree: 13
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

2._MATINA_1_/6 RUQ_1715

96.3 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

3._MATINA_1_/6 MITC-000114

96.3 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

4._CATONGO_1 GC-08-109-3-8

96.3 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

5._SIAL_88 GC-01-52-3-7

95.7 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 7, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

6._BE_10 GC-08-90-2-13

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

7._EEG_27 GC-08-254-8-22

95.1 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

8._B_12_/2_[POU] RUQ_436

95.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

9._SC_9_[UNK] RUQ_44

95.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

10._AMELONADO_[VAR] MITC-000366

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

11._LCT_EEN_46 MITC-000412

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

12._UF_273 MITC-000717

95.1 %
81 shared markers

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USDA-SHRS, United States of America
 Mars, 2018

13._AMELONADO_[VAR] AMELONADO_[VAR]_Fld#_14_Plt#_5

95.1 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 14, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

14._SIAL_42 SIAL_42_Fld#_146_Plt#_6

95.1 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 146, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

15._GU_207 GC-01-56-3-11

95 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 11, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

16._SIC_628 GC-06-15-1-15

95 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 15, Tree: 1 > FP1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

17._SIAL_70 GC-01-39-2-16

93.8 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 12, Tree: 1
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

18._FSC_13 RUQ_1535

93.8 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

19._GDL_3 RUQ_553

93.8 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

20._SIC_1 SIC_1_Fld#_51_Plt#_5

93.8 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 51, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

21._CATONGO_1 GC-08-277-8-49

93.8 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: Nursery, Block: -, Rep: -, Tree: 7
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

22._SIAL_169 GC-01-41-2-18

93.8 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 2, Rep: 14, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

23._SIAL_505 GC-01-48-3-3

93.8 %
80 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 3, Rep: 3, Tree: 4
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

24._GU_300 GC-08-63-1-85

93.2 %
81 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 8, Block: 1, Rep: 85, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

25._BE_8 RUQ_1694

93.2 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

26._CC_37 CC_37_Fld#_69B_Plt#_4

93.2 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 69B, Tree: 4
 Mars, 2018

27._SIC_2 SIC_2_Fld#_120_Plt#_6

93.2 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 120, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

28._SIC_7 SIC_7_Fld#_68_Plt#_6

93.2 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 68, Tree: 6
Notes: TARS_Cacao_collection
 Mars, 2018

29._SIAL_44 SIAL_44_Fld#_66_Plt#_5

92.6 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 66, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

30._SIAL_98 SIAL_98_Fld#_84_Plt#_5

92.6 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 84, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

31._EEG_8 RUQ_1726

91.4 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

32._BE_5 RUQ_1719

90.7 %
81 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

33._MAR_9 RUQ_557

90.7 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

34._NACIONAL NACIONAL_Fld#_189_Plt#_5

90.7 %
81 shared markers

 View  Any
USDA-TARS, United States of America
Location: Field: 189, Tree: 5
Notes: TARS_Cacao_collection
 Mars, 2018

35._GS_13 RUQ_683

90.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

36._N_38_[T38] RUQ_1159

90.1 %
81 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

37._Round_Leaf_Cacao ROUND_LEAF_Fld#_203_Plt#_1

90.1 %
81 shared markers

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USDA-TARS, United States of America
Location: Field: 203, Tree: 1
Notes: TARS_Cacao_collection
 Mars, 2018

38._Round_Leaf_Cacao Round_Leaf_Cacao_Fld#_203_Plt#_2

90.1 %
81 shared markers

 View  View all  Clone  Any
USDA-TARS, United States of America
Location: Field: 203, Tree: 2
 Mars, 2018

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1383 20TcSNP1414
21TcSNP1439 22TcSNP144 23TcSNP1442 24TcSNP1458 25TcSNP1484
26TcSNP150 27TcSNP151 28TcSNP1520 29TcSNP154 30TcSNP174
31TcSNP193 32TcSNP226 33TcSNP230 34TcSNP240 35TcSNP242
36TcSNP25 37TcSNP28 38TcSNP316 39TcSNP32 40TcSNP329
41TcSNP364 42TcSNP372 43TcSNP413 44TcSNP418 45TcSNP42
46TcSNP429 47TcSNP430 48TcSNP448 49TcSNP497 50TcSNP521
51TcSNP529 52TcSNP547 53TcSNP560 54TcSNP561 55TcSNP577
56TcSNP591 57TcSNP60 58TcSNP602 59TcSNP619 60TcSNP653
61TcSNP689 62TcSNP723 63TcSNP731 64TcSNP75 65TcSNP751
66TcSNP776 67TcSNP799 68TcSNP823 69TcSNP836 70TcSNP860
71TcSNP872 72TcSNP891 73TcSNP894 74TcSNP899 75TcSNP90
76TcSNP917 77TcSNP929 78TcSNP944 79TcSNP953 80TcSNP994
81TcSNP998