SNP Profiles matching LP 1 /41 [POU]

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCCCGGCTGGCCCCAACCGGGGTTCC
1._LP_1_/41_[POU]___
____CCGGCT__CCCCAACC____TT__
2._LP_1_/41_[POU]___
____CCGGCT__CC__AACC____TT__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
GGCCGGGGCCTTCTTTGGAGGGCCGGCG
1._LP_1_/41_[POU]___
GGCCGGGGCC__CT__GG______GG__
2._LP_1_/41_[POU]___
GGCCGGGGCC__CT__GG______GG__
 29 30 31 32 33 34 35 36 37 38 39 40 41  
_Input profile
TTAACCCCGTGGTTTTCCCTCTCGAGX_X
1._LP_1_/41_[POU]___
TTAA__CC______TT____CTCGAGX_X
2._LP_1_/41_[POU]___
TTAA__CC______TT____CTCGAGX_X

Input profile: LP_1_/41_[POU] RUQ_353

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._LP_1_/41_[POU] RUQ_353

identical
23 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

2._LP_1_/41_[POU]

identical
22 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper C796
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP560 18TcSNP577 19TcSNP591 20TcSNP602
21TcSNP619 22TcSNP702 23TcSNP723 24TcSNP731 25TcSNP799
26TcSNP823 27TcSNP872 28TcSNP878 29TcSNP891 30TcSNP998
31TcSNP999 32TcSNP1060 33TcSNP1063 34TcSNP1111 35TcSNP1126
36TcSNP1253 37TcSNP1309 38TcSNP1439 39TcSNP1442 40TcSNP1458
41TcSNP1484