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_Input profile | GG | TT | CC | GT | GG | AT | TT | TT | TT | CC | GG | AA | X_X | X_X |
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| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | __ | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CT | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | __ | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | __ | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | CC | GG | AG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | __ | __ | __ | CC | GG | GG | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | __ | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | TT | CC | GG | GG | TT | TT | TT | TT | CC | GG | AA | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | TT | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | TT | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | TT | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | TT | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | TT | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | TT | GG | GG | X_X | X_X | |
| GG | __ | CC | __ | __ | __ | TT | __ | __ | TT | GG | GG | X_X | X_X |
| 1 | TcSNP75 | 2 | TcSNP90 | 3 | TcSNP144 | 4 | TcSNP150 | 5 | TcSNP151 |
| 6 | TcSNP174 | 7 | TcSNP193 | 8 | TcSNP226 | 9 | TcSNP230 | 10 | TcSNP242 |
| 11 | TcSNP329 | 12 | TcSNP364 | 13 | TcSNP448 | 14 | TcSNP469 | 15 | TcSNP529 |
| 16 | TcSNP560 | 17 | TcSNP577 | 18 | TcSNP591 | 19 | TcSNP602 | 20 | TcSNP619 |
| 21 | TcSNP702 | 22 | TcSNP723 | 23 | TcSNP731 | 24 | TcSNP799 | 25 | TcSNP823 |
| 26 | TcSNP872 | 27 | TcSNP878 | 28 | TcSNP891 | 29 | TcSNP998 | 30 | TcSNP999 |
| 31 | TcSNP1060 | 32 | TcSNP1063 | 33 | TcSNP1111 | 34 | TcSNP1126 | 35 | TcSNP1253 |
| 36 | TcSNP1309 | 37 | TcSNP1439 | 38 | TcSNP1442 | 39 | TcSNP1458 | 40 | TcSNP1484 |