SNP Profiles matching PA 195 [PER]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	AC	GG	CT	GG	AC	CC	AG	CC	GG	GG	AA	CC
1._PA_45_[PER]___	__	__	AC	GG	CT	__	AC	__	AG	CC	__	__	AA	__
2._PA_45_[PER]___	__	__	AC	GG	CT	__	AC	__	AG	CC	__	__	AA	__
3._PA_137_[PER]___	__	__	AC	GT	CT	__	AC	CC	AG	CC	__	__	AA	__
4._PA_56_[PER]___	__	__	CC	GG	CC	__	AC	CC	AG	CC	__	__	AA	__
5._PA_137_[PER]___	__	__	AC	GT	CT	__	AC	CC	AG	CC	__	__	AA	__
6._PA_72_[PER]___	__	__	AC	GT	CC	__	AC	CC	AG	CC	__	__	AA	__
7._PA_56_[PER]___	__	__	CC	GG	CC	__	AC	CC	AG	CC	__	__	AA	__
8._PA_56_[PER]___	TT	CC	CC	GG	CC	GG	AC	CC	AG	CC	GG	GG	AA	CC
9._PA_128_[PER]___	__	__	AC	GG	CC	__	AC	__	AG	CC	__	__	AA	__
10._PA_137_[PER]___	__	__	AC	GT	CT	__	AC	__	AG	CC	__	__	AA	__
11._PA_137_[PER]___	__	__	AC	GT	CT	__	AC	__	AG	CC	__	__	AA	__
12._PA_137_[PER]___	__	__	AC	GT	CT	__	AC	__	AG	CC	__	__	AA	__
13._PA_207_[PER]___	__	__	AC	GT	CT	__	AA	__	AG	CC	__	__	AA	__
14._PA_72_[PER]___	__	__	AC	GT	CC	__	AC	__	AG	CC	__	__	AA	__
15._PA_88_[PER]___	__	__	AC	GG	__	__	AC	__	AA	CC	__	__	AA	__
16._PA_289_[PER]___	TT	CC	AC	GT	CT	GG	AA	CC	GG	CC	GG	GG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	AC	CT	GG	CG	CC	CT	TT	CC	GG	AA	TT	AA	GG
1._PA_45_[PER]___	AA	CC	CT	GT	CG	AC	__	TT	__	__	__	__	__	GG
2._PA_45_[PER]___	AA	CC	CT	GT	CG	AC	__	TT	__	__	__	__	__	GG
3._PA_137_[PER]___	AG	AC	CT	GG	CG	CC	__	TT	__	GG	__	__	__	GG
4._PA_56_[PER]___	AA	AC	CT	GT	CG	CC	__	TT	__	GG	__	__	__	GG
5._PA_137_[PER]___	AG	AC	CT	GG	CG	CC	__	TT	__	GG	__	__	__	GG
6._PA_72_[PER]___	AA	AC	CT	GT	CG	CC	__	TT	__	GG	__	__	__	GG
7._PA_56_[PER]___	AA	AC	CT	GT	CG	CC	__	TT	__	GG	__	__	__	GG
8._PA_56_[PER]___	AA	AC	CT	GT	CG	CC	TT	TT	CT	GG	AG	TT	AA	GG
9._PA_128_[PER]___	AA	AA	CC	GT	CG	CC	__	TT	__	__	__	__	__	GG
10._PA_137_[PER]___	AG	AC	CT	GG	CG	CC	__	TT	__	__	__	__	__	GG
11._PA_137_[PER]___	AG	AC	CT	GG	CG	CC	__	TT	__	GG	__	__	__	GG
12._PA_137_[PER]___	AG	AC	CT	GG	CG	CC	__	TT	__	GG	__	__	__	GG
13._PA_207_[PER]___	AA	AC	TT	GG	CG	AC	__	TT	__	__	__	__	__	GG
14._PA_72_[PER]___	AA	AC	CT	GT	CG	CC	__	TT	__	__	__	__	__	GG
15._PA_88_[PER]___	AA	CC	CT	GG	GG	CC	__	TT	__	GG	__	__	__	GG
16._PA_289_[PER]___	AA	AA	CT	GG	CG	CC	TT	TT	CC	GG	AG	TT	AA	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	AA	AG	CC	CC	GG	GG	TT	TT	CT	CC	CT	GG
1._PA_45_[PER]___	CC	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	GG
2._PA_45_[PER]___	CC	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	GG
3._PA_137_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	CC
4._PA_56_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	CG
5._PA_137_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	CC
6._PA_72_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	GG
7._PA_56_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	CG
8._PA_56_[PER]___	CC	CC	__	AG	CC	CC	GG	GG	TT	TT	CT	CC	CT	CG
9._PA_128_[PER]___	CC	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	GG
10._PA_137_[PER]___	CC	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	CC
11._PA_137_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	CC
12._PA_137_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	CC
13._PA_207_[PER]___	CC	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	GG
14._PA_72_[PER]___	CC	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	GG
15._PA_88_[PER]___	__	CC	__	AG	__	CC	__	__	__	TT	__	__	CT	GG
16._PA_289_[PER]___	CC	CC	__	AG	CC	CC	GG	GG	TT	TT	CC	CT	CT	GG

	43
_Input profile	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._PA_45_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._PA_45_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._PA_137_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._PA_56_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._PA_137_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._PA_72_[PER]___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._PA_56_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._PA_56_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._PA_128_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._PA_137_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._PA_137_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._PA_137_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._PA_207_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._PA_72_[PER]___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._PA_88_[PER]___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._PA_289_[PER]___	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: SLA_16 RUQ_1092

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._PA_45_[PER]

93.5 %
23 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A F528 T3

Dapeng Zhang, 2014

2._PA_45_[PER]

93.5 %
23 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 261

Dapeng Zhang, 2014

3._PA_137_[PER] RUQ_1081

91.7 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

4._PA_56_[PER] RUQ_32

91.7 %
24 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

5._PA_137_[PER]

91.7 %
24 shared markers

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Malaysian Cocoa Board (MCB), Malaysia

Location: Plot 1 - Row 7 C0181 28

Dapeng Zhang, 2016

6._PA_72_[PER]

91.7 %
24 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D 633

Dapeng Zhang, 2016

7._PA_56_[PER]

91.7 %
24 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D 238

Dapeng Zhang, 2016

8._PA_56_[PER] RUQ_32

91.7 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

9._PA_128_[PER]

91.3 %
23 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 5A D272 T2

Dapeng Zhang, 2014

10._PA_137_[PER]

91.3 %
23 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 5A D274 T1

Dapeng Zhang, 2014

11._PA_137_[PER]

91.3 %
23 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 5A D274 T1

Dapeng Zhang, 2016

12._PA_137_[PER]

91.3 %
23 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D430

Dapeng Zhang, 2016

13._PA_207_[PER]

91.3 %
23 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 731

Dapeng Zhang, 2014

14._PA_72_[PER]

91.3 %
23 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 633

Dapeng Zhang, 2014

15._PA_88_[PER]

90.9 %
22 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D677

Dapeng Zhang, 2016

16._PA_289_[PER] RUQ_952

90.5 %
42 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP999	34	TcSNP1060	35	TcSNP1063
36	TcSNP1111	37	TcSNP1126	38	TcSNP1253	39	TcSNP1309	40	TcSNP1439
41	TcSNP1442	42	TcSNP1458	43	TcSNP1484