SNP Profiles matching GU 144 /C

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
1._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
2._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
3._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
4._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
5._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
6._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
7._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
8._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
9._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
10._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__
11._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
12._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
13._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
14._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
15._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
16._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
17._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
18._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
19._MXC_67___	TT	AC	AA	GT	CC	AA	CC	GG	GG	CC	AA	AG	AT	CG
20._MXC_67___	TT	AC	AA	GT	CC	__	CC	GG	GG	CC	AA	AG	AT	CG
21._MXC_67___	__	__	AA	GT	CC	__	CC	GG	GG	CC	__	__	AT	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CC	CT	GG	CC	AA	CC	TT	CC	TT	AA	TT	AC	CG
1._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
2._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
3._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
4._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
5._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
6._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
7._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
8._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
9._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
10._MXC_67___	GG	CC	CT	GG	CC	AA	__	TT	__	TT	__	__	__	CG
11._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
12._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
13._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
14._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
15._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
16._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
17._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
18._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
19._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
20._MXC_67___	GG	CC	CT	GG	CC	AA	CC	TT	CT	TT	AA	TT	AC	CG
21._MXC_67___	GG	CC	CT	GG	CC	AA	__	CT	__	TT	__	__	__	CG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
1._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
2._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
3._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
4._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
5._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
6._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
7._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
8._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
9._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
10._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG
11._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
12._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
13._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
14._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
15._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
16._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
17._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
18._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
19._MXC_67___	CC	CC	AA	AG	CC	CT	TT	AG	AA	GG	TT	CC	CC	CG
20._MXC_67___	CC	CC	AA	AG	CC	CT	__	AG	AA	GG	TT	CC	CC	CG
21._MXC_67___	__	CC	__	AG	__	CT	__	__	__	GG	__	__	CC	CG

	43
_Input profile	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
17._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
18._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
19._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
20._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
21._MXC_67___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: CRU_104 RUQ_104

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._MXC_67

identical
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5333 5 > FP

Dapeng Zhang, 2016

2._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5333 4

Dapeng Zhang, 2016

3._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 6 > FP

Dapeng Zhang, 2016

4._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 4 > FP

Dapeng Zhang, 2016

5._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 12 > F

Dapeng Zhang, 2016

6._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 16

Dapeng Zhang, 2016

7._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 9

Dapeng Zhang, 2016

8._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 5

Dapeng Zhang, 2016

9._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 2

Dapeng Zhang, 2016

10._MXC_67

identical
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3202 1

Dapeng Zhang, 2016

11._MXC_67 GC-03-014-2-02

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

12._MXC_67 GC-03-014-2-02

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP1

13._MXC_67 GC-03-014-2-02

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

14._MXC_67 GC-03-014-2-02

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6 > FP2

15._MXC_67 GC-03-014-2-02

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

16._MXC_67 GC-03-014-2-02

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12 > FP4

17._MXC_67 GC-03-014-2-02

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

18._MXC_67 GC-05-131-3-33

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

19._MXC_67 GC-05-131-3-33

98.8 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5 > FP3

20._MXC_67 GC-03-014-2-02

98.8 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

21._MXC_67 RUQ_104

97.9 %
24 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP999	34	TcSNP1060	35	TcSNP1063
36	TcSNP1111	37	TcSNP1126	38	TcSNP1253	39	TcSNP1309	40	TcSNP1439
41	TcSNP1442	42	TcSNP1458	43	TcSNP1484