SNP Profiles matching EBC 148

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	TT	CC	GG	AC	CG	AG	TT	AG	GG	AA	CC
1._IMC_38___	TT	CC	CC	TT	CC	GG	AC	CG	AG	TT	AG	GG	AA	CC
2._LP_4_/20_[POU]___	TT	CC	CC	TT	CT	GG	AC	GG	AG	CT	AG	GG	AA	CC
3._CERRO_AZUL_10___	TT	CC	AC	TT	CT	GG	AC	CC	AG	TT	AG	GG	AA	CC
4._IMC_60___	TT	CC	AC	TT	CC	GG	AC	GG	AG	CT	AG	GG	AA	CC
5._IMC_11___	TT	CC	AC	GT	CT	GG	AC	CG	AG	TT	AG	GG	AA	CC
6._IMC_14___	TT	CC	AC	GT	CT	GG	AC	CG	AG	TT	AG	GG	AA	CC
7._IMC_16___	TT	CC	CC	GT	CT	GG	AC	CG	AG	CT	AA	GG	AA	CC
8._IMC_6___	TT	CC	AC	GT	CT	GG	AC	CG	AG	TT	AG	GG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CT	GT	GG	AA	CT	CC	TT	GG	GG	TT	AA	CC
1._IMC_38___	AA	CC	CT	GT	GG	AA	CT	CC	TT	GG	GG	TT	AA	CC
2._LP_4_/20_[POU]___	AA	CC	CT	GT	GG	AA	CC	CC	TT	GG	GG	TT	AC	CC
3._CERRO_AZUL_10___	AA	CC	CT	GG	GG	AA	CT	CC	TT	GG	GG	TT	AA	CC
4._IMC_60___	AA	CC	CT	GG	CG	AA	CT	CC	TT	GG	GG	TT	AC	CC
5._IMC_11___	AA	CC	CT	GG	GG	AA	CC	CC	TT	GG	GG	TT	AC	CC
6._IMC_14___	AA	CC	CT	GG	GG	AA	CC	CC	TT	GG	GG	TT	AC	CC
7._IMC_16___	AA	CC	CT	GT	GG	AA	CT	CC	TT	GG	GG	TT	AC	CC
8._IMC_6___	AA	CC	CT	GG	GG	AA	CC	CC	TT	GG	GG	TT	AC	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	GG	AA	CC	CC	GG	GG	TT	GG	TT	CC	TT	CG	AG
1._IMC_38___	CC	GG	AA	CC	CC	GG	GG	TT	GG	TT	CC	TT	CG	AG
2._LP_4_/20_[POU]___	CC	__	AA	CC	CC	GG	GG	TT	GG	TT	CC	TT	CG	AG
3._CERRO_AZUL_10___	CC	__	AA	CC	CT	GG	GG	TT	TT	TT	CC	TT	CG	AG
4._IMC_60___	CC	GG	AA	CC	CT	GG	GG	TT	GG	CT	CC	TT	CG	AG
5._IMC_11___	CC	__	AA	CC	CT	GG	GG	TT	GT	TT	CC	TT	CG	AG
6._IMC_14___	CC	__	AA	CC	CT	GG	GG	TT	GT	TT	CC	TT	CG	AG
7._IMC_16___	CC	__	AA	CC	CT	GG	GG	TT	GT	CT	CC	TT	CG	AG
8._IMC_6___	CC	__	AA	CC	CT	GG	GG	TT	GT	TT	CC	TT	CG	AG

Input profile: EBC_148 RUQ_1599

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._IMC_38 RUQ_1628

identical
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._LP_4_/20_[POU] RUQ_1676

93.9 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._CERRO_AZUL_10 RUQ_936

91.5 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

4._IMC_60 RUQ_1617

90.5 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

5._IMC_11 RUQ_8

90.2 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

6._IMC_14 RUQ_1634

90.2 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

7._IMC_16 RUQ_861

90.2 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

8._IMC_6 RUQ_761

90.2 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP899
31	TcSNP998	32	TcSNP999	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484