SNP Profiles matching EET 233 [ECU]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
1._GC-05-085-2-36	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
2._GC-05-149-4-02	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
3._GC-05-149-4-02	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
4._GC-05-178-4-31	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
5._GC-05-178-4-31	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
6._GC-05-085-2-36	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
7._GC-05-085-2-36	TT	AC	CC	GT	CT	GG	CC	CC	_	CC	AG	GG	TT	CC
8._GC-05-178-4-31	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
9._GC-05-085-2-36	TT	AC	CC	GT	CT	GG	CC	CC	AA	CC	_	GG	TT	CC
10._GC-05-085-2-36	TT	AC	_	GT	CT	GG	CC	CC	AA	CC	AG	GG	TT	CC
11._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
12._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
13._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
14._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
15._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
16._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
17._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
18._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	_	CC	_	_	TT	_
19._EET_233_[ECU]	_	_	_	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
20._EET_233_[ECU]	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_
21._RUQ_1517	_	_	CC	GT	CT	_	CC	CC	AA	CC	_	_	TT	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AC	CT	GT	GG	CC	CT	CT	TT	GG	AG	TT	AC	GG
1._GC-05-085-2-36	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
2._GC-05-149-4-02	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
3._GC-05-149-4-02	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
4._GC-05-178-4-31	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
5._GC-05-178-4-31	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
6._GC-05-085-2-36	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
7._GC-05-085-2-36	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
8._GC-05-178-4-31	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	AC	GG
9._GC-05-085-2-36	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	_	GG
10._GC-05-085-2-36	AG	AC	CT	GT	CG	CC	CT	CT	TT	GG	AG	TT	_	GG
11._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
12._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
13._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
14._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
15._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
16._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
17._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
18._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
19._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
20._EET_233_[ECU]	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG
21._RUQ_1517	AG	AC	CT	GT	CG	CC	_	CT	_	GG	_	_	_	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
1._GC-05-085-2-36	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
2._GC-05-149-4-02	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
3._GC-05-149-4-02	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
4._GC-05-178-4-31	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
5._GC-05-178-4-31	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
6._GC-05-085-2-36	GG	TT	AG	CC	GG	AG	TT	_	TT	CC	CT	CC	GG	X_X
7._GC-05-085-2-36	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
8._GC-05-178-4-31	GG	TT	AG	CC	GG	AG	TT	GG	_	CC	CT	CC	GG	X_X
9._GC-05-085-2-36	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
10._GC-05-085-2-36	GG	TT	AG	CC	GG	AG	TT	GG	TT	CC	CT	CC	GG	X_X
11._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
12._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
13._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
14._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
15._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
16._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
17._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
18._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
19._EET_233_[ECU]	_	TT	AG	CC	_	_	_	GG	_	_	CT	CC	GG	X_X
20._EET_233_[ECU]	_	TT	AG	CC	_	_	_	_	_	_	CT	CC	GG	X_X
21._RUQ_1517	_	TT	AG	CT	_	_	_	GG	_	_	CT	CC	GG	X_X

Input profile: EET_233_[ECU] RUQ_1517

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._EET_233_[ECU] GC-05-085-2-36

98.8 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

2._EET_233_[ECU] GC-05-149-4-02

98.8 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP2

3._EET_233_[ECU] GC-05-149-4-02

98.8 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

4._EET_233_[ECU] GC-05-178-4-31

98.8 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

5._EET_233_[ECU] GC-05-178-4-31

98.8 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

6._EET_233_[ECU] GC-05-085-2-36

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL1

Notes: PL1 FP1

7._EET_233_[ECU] GC-05-085-2-36

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL5

Notes: PL5 FP4

8._EET_233_[ECU] GC-05-178-4-31

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP2

9._EET_233_[ECU] GC-05-085-2-36

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL2

Notes: PL2 FP2

10._EET_233_[ECU] GC-05-085-2-36

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL3

Notes: PL3 FP3

11._EET_233_[ECU]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5431 3 > FP

Dapeng Zhang, 2016

12._EET_233_[ECU]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5431 5

Dapeng Zhang, 2016

13._EET_233_[ECU]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5431 4

Dapeng Zhang, 2016

14._EET_233_[ECU]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5402 1 > FP

Dapeng Zhang, 2016

15._EET_233_[ECU]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5402 2

Dapeng Zhang, 2016

16._EET_233_[ECU]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5236 4

Dapeng Zhang, 2016

17._EET_233_[ECU]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5236 2 > FP

Dapeng Zhang, 2016

18._EET_233_[ECU]

97.8 %
23 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5236 5 > FP

Dapeng Zhang, 2016

19._EET_233_[ECU]

97.8 %
23 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5236 3 > FP

Dapeng Zhang, 2016

20._EET_233_[ECU]

97.8 %
23 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5236 1 > FP

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

21._EET_233_[ECU] RUQ_1517

95.8 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484