SNP Profiles matching EET 397 [ECU]

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_Input profile	TT	CC	GG	GG	CC	CC	AA	CT	GG	TT	CC	AG	AA	CC
1._EET_397_[ECU]___	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
2._EET_397_[ECU]___	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
3._EET_397_[ECU]___	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
4._EET_397_[ECU]___	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
5._EET_397_[ECU]___	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
6._EET_397_[ECU]___	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
7._EET_397_[ECU]___	__	AC	GG	__	CC	CC	AA	CT	__	AT	__	AG	AA	CC
8._EET_397_[ECU]___	__	AC	GG	__	CC	CC	__	CT	__	AT	__	AG	AA	CC
9._EET_397_[ECU]___	__	AC	GG	__	CC	__	AA	CT	__	AT	__	AG	AA	CC
10._EET_397_[ECU]___	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
11._EET_397_[ECU]___	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
12._EET_397_[ECU]___	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
13._EET_397_[ECU]___	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
14._EET_397_[ECU]___	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
15._EET_397_[ECU]___	TT	AC	GG	GG	CC	CC	AA	CT	GG	AT	CG	AG	AA	CC
16._EET_397_[ECU]___	TT	AC	GG	GG	CC	CC	__	CT	GG	AT	CG	AG	AA	CC
17._LP_3_/35_[POU]___	__	CC	GG	__	CC	CC	AA	CT	__	TT	__	AG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
1._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
2._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
3._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
4._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
5._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
6._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
7._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
8._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
9._EET_397_[ECU]___	GG	CG	__	TT	GG	__	__	__	CG	__	CT	AA	__	CC
10._EET_397_[ECU]___	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
11._EET_397_[ECU]___	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
12._EET_397_[ECU]___	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
13._EET_397_[ECU]___	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
14._EET_397_[ECU]___	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
15._EET_397_[ECU]___	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
16._EET_397_[ECU]___	GG	CG	CT	TT	GG	AA	TT	CC	CG	GG	CT	AA	CC	CC
17._LP_3_/35_[POU]___	GT	GG	__	TT	GT	__	__	__	GG	__	CT	AA	__	CC

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_Input profile	GG	AT	GG	CT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
1._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
2._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
3._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
4._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
5._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
6._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
7._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
8._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
9._EET_397_[ECU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
10._EET_397_[ECU]___	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
11._EET_397_[ECU]___	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
12._EET_397_[ECU]___	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
13._EET_397_[ECU]___	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
14._EET_397_[ECU]___	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
15._EET_397_[ECU]___	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
16._EET_397_[ECU]___	GG	AT	GG	TT	CC	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X
17._LP_3_/35_[POU]___	__	__	GG	__	__	TT	CC	GG	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: EET_397_[ECU] RUQ_759

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 9

Dapeng Zhang, 2016

2._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 7

Dapeng Zhang, 2016

3._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 6

Dapeng Zhang, 2016

4._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 5

Dapeng Zhang, 2016

5._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 4

Dapeng Zhang, 2016

6._EET_397_[ECU]

95.5 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 1

Dapeng Zhang, 2016

7._EET_397_[ECU] RUQ_759

95.5 %
22 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

8._EET_397_[ECU]

95.2 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8846 2

Dapeng Zhang, 2016

9._EET_397_[ECU]

95.2 %
21 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F456 T11

Dapeng Zhang, 2016

10._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

11._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

12._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

13._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

14._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

15._EET_397_[ECU] GC-08-274-8-46

94.4 %
36 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

16._EET_397_[ECU] GC-08-274-8-46

94.3 %
35 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

17._LP_3_/35_[POU]

90.9 %
22 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper C 969

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP144	3	TcSNP150	4	TcSNP174	5	TcSNP193
6	TcSNP226	7	TcSNP230	8	TcSNP242	9	TcSNP329	10	TcSNP372
11	TcSNP448	12	TcSNP469	13	TcSNP529	14	TcSNP534	15	TcSNP560
16	TcSNP577	17	TcSNP602	18	TcSNP619	19	TcSNP723	20	TcSNP731
21	TcSNP799	22	TcSNP823	23	TcSNP872	24	TcSNP878	25	TcSNP891
26	TcSNP998	27	TcSNP999	28	TcSNP1060	29	TcSNP1111	30	TcSNP1126
31	TcSNP1253	32	TcSNP1309	33	TcSNP1439	34	TcSNP1442	35	TcSNP1458
36	TcSNP1484