SNP Profiles matching BE 8

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
1._MAR_1___	__	__	CC	TT	CC	__	AA	__	AA	CC	__	__	AA	__
2._MAR_20___	__	__	CC	TT	CC	__	AA	__	AA	CC	__	__	AA	__
3._GF_32___	TT	CC	AA	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
4._MAR_9___	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
5._GS_13___	TT	CC	CC	TT	CC	AG	AA	CC	AA	CC	GG	GG	AA	CC
6._GDL_3___	TT	CC	CC	TT	CC	GG	AA	CC	AA	__	GG	GG	AA	__
7._LCT_EEN_62_/S-4___	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
8._DOM_30___	TT	AC	CC	TT	CC	AG	AA	CC	AA	CC	GG	GG	__	CC
9._DOM_25___	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
10._SPEC_41_/6-18___	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
11._APA_4___	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	TT	TT	GG	AA	CC	CC	TT	GG	GG	TT	CC	GG
1._MAR_1___	AA	CC	TT	TT	GG	AA	__	TT	__	__	__	__	__	GG
2._MAR_20___	AA	CC	TT	TT	GG	AA	__	TT	__	__	__	__	__	GG
3._GF_32___	AA	CC	TT	TT	GG	AA	CC	CC	TT	GG	GG	TT	CC	GG
4._MAR_9___	AA	CC	TT	TT	GG	AA	CC	TT	TT	GG	GG	TT	AA	GG
5._GS_13___	AA	CC	__	TT	GG	AA	CC	TT	TT	GG	GG	TT	CC	CG
6._GDL_3___	__	CC	TT	__	GG	AA	TT	TT	TT	GG	__	TT	__	__
7._LCT_EEN_62_/S-4___	AA	CC	TT	TT	GG	CC	TT	TT	TT	GG	GG	TT	CC	GG
8._DOM_30___	AA	CC	__	TT	GG	AA	CC	TT	TT	GG	GG	TT	AC	GG
9._DOM_25___	AA	CC	TT	TT	GG	CC	CC	CT	TT	GG	GG	TT	AC	GG
10._SPEC_41_/6-18___	AA	CC	TT	TT	CC	AA	CC	CC	TT	GG	GG	TT	AA	GG
11._APA_4___	AA	CC	__	TT	CC	AA	CC	CC	TT	GG	GG	TT	AA	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	AA	AA	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG
1._MAR_1___	CC	CC	__	AA	__	CC	__	__	__	TT	__	__	CC	GG
2._MAR_20___	CC	CC	__	AA	__	CC	__	__	__	TT	__	__	CC	GG
3._GF_32___	CC	CC	__	AA	TT	CC	GG	GG	TT	TT	TT	TT	CC	GG
4._MAR_9___	CC	CC	__	AA	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG
5._GS_13___	CC	CC	__	AA	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG
6._GDL_3___	CC	CC	__	AA	__	CC	GG	__	TT	TT	TT	__	__	GG
7._LCT_EEN_62_/S-4___	CC	CC	__	AA	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG
8._DOM_30___	CC	CC	AA	AA	TT	CC	GG	AA	TT	TT	CT	TT	CC	GG
9._DOM_25___	CG	CC	__	AG	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG
10._SPEC_41_/6-18___	CC	CC	AA	GG	TT	CC	GG	AA	TT	TT	CC	TT	CC	GG
11._APA_4___	CC	CC	__	GG	TT	CC	GG	AA	TT	TT	CC	TT	CC	GG

	43
_Input profile	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._MAR_1___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._MAR_20___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._GF_32___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._MAR_9___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._GS_13___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._GDL_3___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._LCT_EEN_62_/S-4___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._DOM_30___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._DOM_25___	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._SPEC_41_/6-18___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._APA_4___	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GDL_7 RUQ_554

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._MAR_1

95.7 %
23 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B188 T1

Dapeng Zhang, 2014

2._MAR_20

95.7 %
23 shared markers

View Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B253 T1

Dapeng Zhang, 2014

3._GF_32 RUQ_648

95.2 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

4._MAR_9 RUQ_557

95.2 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

5._GS_13 RUQ_683

95.1 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

6._GDL_3 RUQ_553

93.5 %
31 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

7._LCT_EEN_62_/S-4 RUQ_678

92.9 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

8._DOM_30 RUQ_549

92.7 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

9._DOM_25 RUQ_673

91.7 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

10._SPEC_41_/6-18 RUQ_1325

90.7 %
43 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

11._APA_4 RUQ_843

90.2 %
41 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP999	34	TcSNP1060	35	TcSNP1063
36	TcSNP1111	37	TcSNP1126	38	TcSNP1253	39	TcSNP1309	40	TcSNP1439
41	TcSNP1442	42	TcSNP1458	43	TcSNP1484

SNP Profiles matching BE 8

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Input profile: GDL_7 RUQ_554

1._MAR_1

95.7 % 23 shared markers

2._MAR_20

95.7 % 23 shared markers

3._GF_32 RUQ_648

95.2 % 42 shared markers

4._MAR_9 RUQ_557

95.2 % 42 shared markers

5._GS_13 RUQ_683

95.1 % 41 shared markers

6._GDL_3 RUQ_553

93.5 % 31 shared markers

7._LCT_EEN_62_/S-4 RUQ_678

92.9 % 42 shared markers

8._DOM_30 RUQ_549

92.7 % 41 shared markers

9._DOM_25 RUQ_673

91.7 % 42 shared markers

10._SPEC_41_/6-18 RUQ_1325

90.7 % 43 shared markers

11._APA_4 RUQ_843

90.2 % 41 shared markers

95.7 %
23 shared markers

95.7 %
23 shared markers

95.2 %
42 shared markers

95.2 %
42 shared markers

95.1 %
41 shared markers

93.5 %
31 shared markers

92.9 %
42 shared markers

92.7 %
41 shared markers

91.7 %
42 shared markers

90.7 %
43 shared markers

90.2 %
41 shared markers