SNP Profiles matching BE 8

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	AT	AA	GG	CT	AA	AG	CT	AA	GG	AA	CC	CC	GT
1._LCT_EEN_162_/S-1010___	__	__	AA	GG	CT	AA	AG	TT	AA	__	AA	CC	CC	GT
2._LCT_EEN_162_/S-1010___	__	__	AA	GG	CT	AA	AG	TT	AA	__	AA	CC	CC	GT
3._LCT_EEN_162_/S-1010___	GG	AT	AA	GG	CT	AA	AG	TT	AA	GG	AA	CC	CC	GT
4._LCT_EEN_162_/S-1010___	GG	AT	AA	GG	CT	AA	AG	TT	AA	AG	AA	CC	CC	GT
5._LCT_EEN_162_/S-1010___	GG	AT	AA	GG	CT	AA	AG	TT	AA	GG	AA	CC	CC	GT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CG	AC	CT	AA	GG	TT	CG	CC	CC	CT	GG	AT	CC	AA
1._LCT_EEN_162_/S-1010___	CG	AC	CT	__	GG	__	CG	CC	CC	__	__	__	__	AA
2._LCT_EEN_162_/S-1010___	CG	AC	CT	__	GG	__	CG	CC	CC	__	__	__	__	AA
3._LCT_EEN_162_/S-1010___	CG	AC	CT	AA	GG	__	CG	__	CC	CT	GG	AT	CC	AA
4._LCT_EEN_162_/S-1010___	CG	AC	CT	AA	GG	__	CG	__	CC	CT	GG	AT	CC	AA
5._LCT_EEN_162_/S-1010___	CG	AC	CT	AA	GG	__	CG	__	CC	CT	GG	AT	CC	AA

	29	30	31	32	33	34	35	36	37	38
_Input profile	TT	AG	CT	CC	TT	CC	TT	TT	CG	CC	X_X	X_X	X_X	X_X
1._LCT_EEN_162_/S-1010___	TT	__	__	__	TT	__	__	TT	CG	__	X_X	X_X	X_X	X_X
2._LCT_EEN_162_/S-1010___	TT	__	__	__	TT	__	__	TT	CG	__	X_X	X_X	X_X	X_X
3._LCT_EEN_162_/S-1010___	TT	AG	CC	CC	TT	CC	TT	TT	CG	CC	X_X	X_X	X_X	X_X
4._LCT_EEN_162_/S-1010___	TT	AG	CC	CC	TT	CC	TT	TT	CG	CC	X_X	X_X	X_X	X_X
5._LCT_EEN_162_/S-1010___	TT	AG	CC	CC	TT	CC	CT	TT	CG	CC	X_X	X_X	X_X	X_X

Input profile: LCT_EEN_162_/S-1010

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A A 60 T1

Dapeng Zhang, 2014

1._LCT_EEN_162_/S-1010 RUQ_70

97.8 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._LCT_EEN_162_/S-1010 RUQ_686

97.8 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._LCT_EEN_162_/S-1010

97.2 %
36 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A A60 T1

Dapeng Zhang, 2016

4._LCT_EEN_162_/S-1010 RUQ_70

95.8 %
36 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

5._LCT_EEN_162_/S-1010 RUQ_686

95.8 %
36 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP230	8	TcSNP242	9	TcSNP372	10	TcSNP429
11	TcSNP469	12	TcSNP529	13	TcSNP534	14	TcSNP560	15	TcSNP577
16	TcSNP591	17	TcSNP619	18	TcSNP645	19	TcSNP723	20	TcSNP836
21	TcSNP872	22	TcSNP878	23	TcSNP891	24	TcSNP917	25	TcSNP929
26	TcSNP953	27	TcSNP994	28	TcSNP998	29	TcSNP1060	30	TcSNP1062
31	TcSNP1144	32	TcSNP1165	33	TcSNP1253	34	TcSNP1350	35	TcSNP1414
36	TcSNP1442	37	TcSNP1458	38	TcSNP1520

SNP Profiles matching BE 8

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Input profile: LCT_EEN_162_/S-1010

1._LCT_EEN_162_/S-1010 RUQ_70

97.8 % 23 shared markers

2._LCT_EEN_162_/S-1010 RUQ_686

97.8 % 23 shared markers

3._LCT_EEN_162_/S-1010

97.2 % 36 shared markers

4._LCT_EEN_162_/S-1010 RUQ_70

95.8 % 36 shared markers

5._LCT_EEN_162_/S-1010 RUQ_686

95.8 % 36 shared markers

97.8 %
23 shared markers

97.8 %
23 shared markers

97.2 %
36 shared markers

95.8 %
36 shared markers

95.8 %
36 shared markers