SNP Profiles matching PA 195 [PER]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AA	GG	TT	CC
1._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AA	GG	__	CC
2._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AA	GG	__	CC
3._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AA	GG	__	CC
4._PA_124_[PER]___	__	GG	GG	CC	__	AA	AA	CC	CG	TT	__	GG	__	CC
5._PA_195_[PER]___	__	GG	GG	CC	__	AA	AA	CC	CG	TT	__	GG	__	CC
6._PA_195_[PER]___	__	GG	GG	CC	__	AA	AA	CC	CG	TT	__	GG	__	CC
7._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	__	CC
8._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	__	CC
9._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	__	CC
10._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	__	CC
11._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	CC	CC
12._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	CC	CC
13._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	CC	CC
14._PA_195_[PER]___	AT	GG	GG	CC	GG	AA	AA	CC	CG	TT	AG	GG	CC	CC
15._PA_128_[PER]___	AT	GG	AG	CC	GG	AA	AA	CC	CG	TT	AA	__	TT	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27
_Input profile	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
1._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
2._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
3._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
4._PA_124_[PER]___	__	__	__	AG	__	__	__	__	__	CC	CG	GG	__	X_X
5._PA_195_[PER]___	__	__	__	AG	__	__	__	__	__	CC	CG	GG	__	X_X
6._PA_195_[PER]___	__	__	__	AG	__	__	__	__	__	CC	CG	GG	__	X_X
7._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
8._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
9._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
10._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
11._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
12._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
13._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
14._PA_195_[PER]___	CG	AA	CC	AG	AG	AA	CC	CC	CC	CC	CG	GG	CC	X_X
15._PA_128_[PER]___	CG	AA	CC	AG	AG	AA	CC	CT	CC	CT	GG	GG	CC	X_X

Input profile: MARPER_27

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 491A

Dapeng Zhang, 2014

1._PA_195_[PER] RUQ_1642

identical
26 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

2._PA_195_[PER] RUQ_1642

identical
26 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

3._PA_195_[PER]

identical
26 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B C165 T1

Dapeng Zhang, 2016

4._PA_124_[PER] RUQ_1576

identical
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

5._PA_195_[PER] RUQ_1642

identical
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

6._PA_195_[PER] RUQ_1642

identical
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

7._PA_195_[PER]

98.1 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5419 4

Dapeng Zhang, 2016

8._PA_195_[PER]

98.1 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5419 1 > FP

Dapeng Zhang, 2016

9._PA_195_[PER]

98.1 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5419 2 > FP

Dapeng Zhang, 2016

10._PA_195_[PER]

98.1 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5419 5 > FP

Dapeng Zhang, 2016

11._PA_195_[PER] GC-05-166-4-19

94.4 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

12._PA_195_[PER] GC-05-166-4-19

94.4 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

13._PA_195_[PER] GC-05-166-4-19

94.4 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

14._PA_195_[PER] GC-05-166-4-19

94.4 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5 > FP4

15._PA_128_[PER]

92.3 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 5A D272 T2

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP32	2	TcSNP150	3	TcSNP230	4	TcSNP242	5	TcSNP429
6	TcSNP469	7	TcSNP529	8	TcSNP534	9	TcSNP577	10	TcSNP619
11	TcSNP645	12	TcSNP723	13	TcSNP836	14	TcSNP891	15	TcSNP929
16	TcSNP953	17	TcSNP994	18	TcSNP998	19	TcSNP1062	20	TcSNP1075
21	TcSNP1165	22	TcSNP1270	23	TcSNP1350	24	TcSNP1442	25	TcSNP1458
26	TcSNP1484	27	TcSNP1520