SNP Profiles matching MARPER 42

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	TT	CC
1._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	__	CC
2._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	__	CC
3._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	__	CC
4._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	__	CC
5._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	__	CC
6._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	__	CC
7._MO_4___	__	GT	AA	CC	__	AA	AA	CC	GG	TT	__	GG	__	CC
8._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	CG	CC
9._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	CG	CC
10._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	CG	CC
11._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	CG	CC
12._IMC_41___	AA	GT	AA	CC	GG	AA	AA	CC	GG	TT	AA	GG	CG	CC
13._GEBP_165_/A-M_[ADI]___	__	GT	AA	CC	__	AA	AA	CC	CG	TT	__	GG	__	CC
14._MO_9___	AA	GT	AA	CC	GG	AA	CC	CT	GG	TT	AA	GG	__	CC
15._MO_9___	AA	GT	AA	CC	GG	AA	CC	CT	GG	TT	AA	GG	__	CC
16._MO_9___	AA	GT	AA	CC	GG	AA	CC	CT	GG	TT	AA	GG	__	CC
17._MO_9___	AA	GT	AA	CC	GG	AA	CC	CT	GG	TT	AA	GG	__	CC
18._MO_9___	AA	GT	AA	CC	GG	AA	CC	CT	GG	TT	AA	GG	__	CC
19._MO_9___	AA	GT	AA	CC	GG	AA	CC	CT	GG	TT	AA	GG	__	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27
_Input profile	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
1._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
2._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
3._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
4._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
5._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
6._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	__	CC	CG	GG	CC	X_X
7._MO_4___	__	__	__	AG	__	__	__	__	__	CC	CG	GG	__	X_X
8._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
9._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
10._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
11._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
12._IMC_41___	GG	AA	CT	AG	GG	AA	CC	CC	AC	CC	CG	GG	CC	X_X
13._GEBP_165_/A-M_[ADI]___	__	__	__	AG	__	__	__	__	__	CC	CG	AG	__	X_X
14._MO_9___	CG	AA	CT	AG	GG	AA	CC	CC	AC	CT	CG	GG	CC	X_X
15._MO_9___	CG	AA	CT	AG	GG	AA	CC	CC	AC	CT	CG	GG	CC	X_X
16._MO_9___	CG	AA	CT	AG	GG	AA	CC	CC	AC	CT	CG	GG	CC	X_X
17._MO_9___	CG	AA	CT	AG	GG	AA	CC	CC	AC	CT	CG	GG	CC	X_X
18._MO_9___	CG	AA	CT	AG	GG	AA	CC	CC	AC	CT	CG	GG	CC	X_X
19._MO_9___	CG	AA	CT	AG	GG	AA	CC	CC	AC	CT	CG	GG	CC	X_X

Input profile: MARPER_42

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 713

Dapeng Zhang, 2014

1._IMC_41

identical
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8847 5

Dapeng Zhang, 2016

2._IMC_41

identical
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8847 4

Dapeng Zhang, 2016

3._IMC_41

identical
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8847 3

Dapeng Zhang, 2016

4._IMC_41

identical
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8847 2

Dapeng Zhang, 2016

5._IMC_41

identical
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8847 1

Dapeng Zhang, 2016

6._IMC_41

identical
25 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F418 T1

Dapeng Zhang, 2016

7._MO_4 RUQ_1529

identical
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

8._IMC_41 GC-08-275-8-47

96.3 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

9._IMC_41 GC-08-275-8-47

96.3 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

10._IMC_41 GC-08-275-8-47

96.3 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

11._IMC_41 GC-08-275-8-47

96.3 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

12._IMC_41 GC-08-275-8-47

96.3 %
27 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

13._GEBP_165_/A-M_[ADI] RUQ_1616

92.9 %
14 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

14._MO_9

90.4 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5321 4 > FP

Dapeng Zhang, 2016

15._MO_9

90.4 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5321 3 > FP

Dapeng Zhang, 2016

16._MO_9

90.4 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5321 2

Dapeng Zhang, 2016

17._MO_9

90.4 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5222 1 > FP

Dapeng Zhang, 2016

18._MO_9

90.4 %
26 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5222 5

Dapeng Zhang, 2016

19._MO_9

90.4 %
26 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D835

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP32	2	TcSNP150	3	TcSNP230	4	TcSNP242	5	TcSNP429
6	TcSNP469	7	TcSNP529	8	TcSNP534	9	TcSNP577	10	TcSNP619
11	TcSNP645	12	TcSNP723	13	TcSNP836	14	TcSNP891	15	TcSNP929
16	TcSNP953	17	TcSNP994	18	TcSNP998	19	TcSNP1062	20	TcSNP1075
21	TcSNP1165	22	TcSNP1270	23	TcSNP1350	24	TcSNP1442	25	TcSNP1458
26	TcSNP1484	27	TcSNP1520