SNP Profiles matching JA 9 /37 [POU]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	GG	CC	TT	AA	CC	GT	CC	TT	AA	AA	CC	AG
1._MAR_11___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
2._MAR_12___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
3._MAR_17___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
4._MAR_1___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
5._MAR_10___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
6._MAR_13___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
7._MAR_14___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
8._MAR_21___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
9._MAR_22___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
10._MAR_9___	TT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
11._MARPER_22___	CT	AA	GG	CC	__	AA	CC	__	CC	__	AA	AA	__	AA
12._AMAZ_5_/2___	TT	AA	GG	CC	TT	AA	CC	TT	CC	TT	AA	AA	CC	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	GG	TT	CC	GG	GG	AA	CT	CC	CC	TT	TT	CC
1._MAR_11___	TT	AA	GG	__	CC	__	GG	AA	TT	__	CC	__	TT	CC
2._MAR_12___	TT	AA	GG	__	CC	__	GG	AA	TT	__	CC	__	TT	CC
3._MAR_17___	TT	AA	GG	__	CC	__	GG	AA	TT	__	CC	__	TT	CC
4._MAR_1___	TT	AA	GG	__	CC	__	GG	AA	TT	__	GG	__	TT	CC
5._MAR_10___	TT	AA	GG	__	CC	__	GG	AA	TT	__	GG	__	TT	CC
6._MAR_13___	TT	AA	GG	__	CC	__	GG	AA	TT	__	GG	__	TT	CC
7._MAR_14___	TT	AA	GG	__	CC	__	GG	AA	TT	__	GG	__	TT	CC
8._MAR_21___	TT	AA	GG	__	CC	__	GG	AA	TT	__	GG	__	TT	CC
9._MAR_22___	TT	AA	GG	__	CC	__	GG	AA	TT	__	GG	__	TT	CC
10._MAR_9___	TT	AA	GG	__	CC	__	GG	AA	TT	__	GG	__	TT	CC
11._MARPER_22___	TT	AA	GG	__	CC	__	GG	AA	TT	__	CC	__	TT	CC
12._AMAZ_5_/2___	TT	AA	GG	TT	CC	GG	GG	AA	TT	AA	CC	TT	TT	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AA	CC	AG	CC	AC	CT	TT	CC	TT	GG	X_X	X_X
1._MAR_11___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
2._MAR_12___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
3._MAR_17___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
4._MAR_1___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
5._MAR_10___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
6._MAR_13___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
7._MAR_14___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
8._MAR_21___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
9._MAR_22___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
10._MAR_9___	AA	GG	__	CC	AA	__	__	__	TT	__	TT	__	X_X	X_X
11._MARPER_22___	AA	GG	__	CC	AA	__	__	__	GT	__	TT	__	X_X	X_X
12._AMAZ_5_/2___	AA	GG	AA	CC	AA	CC	AA	CC	TT	CC	TT	GG	X_X	X_X

Input profile: JA_9_/37_[POU]

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 5B E394 T8

Dapeng Zhang, 2016

1._MAR_11

94.2 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B252 T2

Dapeng Zhang, 2014

2._MAR_12

94.2 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B268 T2

Dapeng Zhang, 2014

3._MAR_17

94.2 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B221 T1

Dapeng Zhang, 2014

4._MAR_1

90.4 %
26 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B188 T1

Dapeng Zhang, 2014

5._MAR_10

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B243 T1

Dapeng Zhang, 2014

6._MAR_13

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B189 T1

Dapeng Zhang, 2014

7._MAR_14

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B207 T1

Dapeng Zhang, 2014

8._MAR_21

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B267 T2

Dapeng Zhang, 2014

9._MAR_22

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B190 T1

Dapeng Zhang, 2014

10._MAR_9

90.4 %
26 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A B220 T3

Dapeng Zhang, 2014

11._MARPER_22

90.4 %
26 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER C 475

Dapeng Zhang, 2014

12._AMAZ_5_/2

90 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A A20 T1

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25