SNP Profiles matching MXC 67

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTAACGCTCTACCTGTTTCTATAGCTAA
1._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
2._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
3._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
4._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
5._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
6._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
7._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
8._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
9._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
10._DOM_16___
CTAACGCTCTACCTGTCTCTAAAGCTAA
11._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
12._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
13._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
14._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
15._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
16._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
17._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
18._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
19._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
20._DOM_1___
CTAACGCTCTACCTGTTTCTATAGCTAA
21._ICS_70___
__AACGCT______GT________CTAG
22._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
23._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
24._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
25._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
26._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
27._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
28._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
29._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
30._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
31._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
32._EQX_107_[EQX]___
CTAACGCTCTACCTGTTTCTATAGCTAG
33._ICS_70___
CTAACGCTCTACCTGTTTCTATAGCTAG
34._ICS_70___
CTAACGCTCTACCTGTTTCTATAGCTAG
35._ICS_70___
CTAACGCTCTACCTGTTTCTATAGCTAG
36._ICS_70___
CTAACGCTCTACCTGTTTCTATAGCTAG
37._EQX_107_[EQX]___
CTAACGCTCTACCT__TTCTATAGCTAG
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CTATCGCTCTCGGGAGTTCCCCGTCTAC
1._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
2._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
3._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
4._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
5._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
6._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
7._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
8._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
9._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
10._DOM_16___
CTATCGCTCTCGGGAGTTCCCCGTCTAC
11._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
12._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
13._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
14._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
15._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
16._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
17._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
18._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
19._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
20._DOM_1___
CTATCGCTCTCGGGAGTTACCCGTCTAC
21._ICS_70___
________CTCCGG__TTCCCGGTCTAC
22._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
23._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
24._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
25._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
26._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
27._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
28._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
29._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
30._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
31._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
32._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
33._ICS_70___
CTATCGCTCTCCGGAATTCCCGGTCTAC
34._ICS_70___
CTATCGCTCTCCGGAATTCCCGGTCTAC
35._ICS_70___
CTATCGCTCTCCGGAATTCCCGGTCTAC
36._ICS_70___
CTATCGCTCTCCGGAATTCCCGGTCTAC
37._EQX_107_[EQX]___
CTATCGCTCTCCGGAATTCCCGGTCTAC
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAGAACTAGACCTGTAAATCGX_XX_XX_X
1._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
2._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
3._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
4._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
5._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
6._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
7._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
8._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
9._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
10._DOM_16___
GGAGAACTAAACCTGTAAATCGX_XX_XX_X
11._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
12._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
13._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
14._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
15._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
16._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
17._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
18._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
19._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
20._DOM_1___
AGGGATCTAAACCTGTAAATCGX_XX_XX_X
21._ICS_70___
AG__AACTAGACCTGTAA____X_XX_XX_X
22._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
23._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
24._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
25._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
26._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
27._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
28._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
29._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
30._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
31._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
32._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
33._ICS_70___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
34._ICS_70___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
35._ICS_70___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
36._ICS_70___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X
37._EQX_107_[EQX]___
AGGGAACTAGACCTGTAAAACGX_XX_XX_X

Input profile: MXC_67

 
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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: CAMPUS 12 X3 Y4
 Dapeng Zhang, 2016

1._DOM_16

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8158 6
 Dapeng Zhang, 2016

2._DOM_16

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8158 5
 Dapeng Zhang, 2016

3._DOM_16

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8158 4
 Dapeng Zhang, 2016

4._DOM_16

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8158 2
 Dapeng Zhang, 2016

5._DOM_16

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8158 1
 Dapeng Zhang, 2016

6._DOM_16 GC-08-047-1-58

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

7._DOM_16 GC-08-047-1-58

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

8._DOM_16 GC-08-047-1-58

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

9._DOM_16 GC-08-047-1-58

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

10._DOM_16 GC-08-047-1-58

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: Dead
 Mars, 2018

11._DOM_1

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8827 5
 Dapeng Zhang, 2016

12._DOM_1

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8827 4
 Dapeng Zhang, 2016

13._DOM_1

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8827 3
 Dapeng Zhang, 2016

14._DOM_1

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8827 2
 Dapeng Zhang, 2016

15._DOM_1

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8827 1
 Dapeng Zhang, 2016

16._DOM_1 GC-08-259-8-27

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

17._DOM_1 GC-08-259-8-27

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

18._DOM_1 GC-08-259-8-27

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

19._DOM_1 GC-08-259-8-27

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

20._DOM_1 GC-08-259-8-27

93.6 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

21._ICS_70 RUQ_321

91.3 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

22._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

23._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

24._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

25._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

26._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

27._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

28._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

29._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

30._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

31._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

32._EQX_107_[EQX] GC-01-024-2-01

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15 > FP3
 Mars, 2018

33._ICS_70

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4210 7 > FP
 Dapeng Zhang, 2016

34._ICS_70

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4210 1 > FP
 Dapeng Zhang, 2016

35._ICS_70 GC-04-028-2-10

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

36._ICS_70 GC-04-028-2-10

91 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP2
 Mars, 2018

37._EQX_107_[EQX] GC-01-024-2-01

90.8 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14 > FP4
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP372 32TcSNP242 33TcSNP230 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25