SNP Profiles matching POUND 10B

 Show/Hide Profiles

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
1._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
2._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
3._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
4._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
5._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
6._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
7._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
8._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
9._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
10._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
11._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
12._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
13._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
14._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
15._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
16._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
17._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
18._POUND_10___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
19._POUND_10_/B___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
20._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
21._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
22._POUND_10_/B___
CCAAGGTT__TTTTCCCCAAGGCCGGTT
23._POUND_10_/B___
CCAAGGTT__TTTTCCCCAAGGCCGGTT
24._POUND_10_/B___
__AAGGTT____TT________CCGG__
25._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
26._EET_400_[ECU]___
CCAAGGTTTTTTTTCCCCAAGGCCGGTT
27._POUND_10_/B___
CCAGGGTTTTTTTTCCCCAAGGCCGGTT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAGGTTTTCGGGAACCAAGGTTCCCCAA
1._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
2._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
3._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
4._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
5._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
6._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
7._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
8._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
9._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
10._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
11._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
12._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
13._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
14._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
15._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
16._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
17._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
18._POUND_10___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
19._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
20._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
21._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
22._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
23._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
24._POUND_10_/B___
______TTCGGG__CCAAGGTTCCCCAA
25._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
26._EET_400_[ECU]___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
27._POUND_10_/B___
AAGGTTTTCGGGAACCAAGGTTCCCCAA
 29 30 31 32 33 34 35 36 37 38 39    
_Input profile
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
1._EET_400_[ECU]___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
2._EET_400_[ECU]___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
3._EET_400_[ECU]___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
4._EET_400_[ECU]___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
5._EET_400_[ECU]___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
6._EET_400_[ECU]___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
7._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
8._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
9._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
10._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
11._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
12._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
13._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
14._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
15._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
16._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
17._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
18._POUND_10___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
19._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
20._EET_400_[ECU]___
GGAACCGGCCAA__GGAATTGGX_XX_XX_X
21._EET_400_[ECU]___
GGAACCGGCCAA__GGAATTGGX_XX_XX_X
22._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
23._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X
24._POUND_10_/B___
__AACCGGCCAACCGGAA____X_XX_XX_X
25._EET_400_[ECU]___
GGAACCGGCCAACTGGAATTGGX_XX_XX_X
26._EET_400_[ECU]___
GGAACCGGCCAACTGGAATTGGX_XX_XX_X
27._POUND_10_/B___
GGAACCGGCCAACCGGAATTGGX_XX_XX_X

Input profile: POUND_10_/B

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 10
 Dapeng Zhang, 2016

1._EET_400_[ECU]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1402 1 > FP
 Dapeng Zhang, 2016

2._EET_400_[ECU]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1402 7
 Dapeng Zhang, 2016

3._EET_400_[ECU]

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1402 2
 Dapeng Zhang, 2016

4._EET_400_[ECU] GC-01-066-4-02

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

5._EET_400_[ECU] GC-01-066-4-02

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

6._EET_400_[ECU] GC-01-066-4-02

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

7._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 1 > FP
 Dapeng Zhang, 2016

8._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 11 > F
 Dapeng Zhang, 2016

9._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 3 > FP
 Dapeng Zhang, 2016

10._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 7
 Dapeng Zhang, 2016

11._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 2
 Dapeng Zhang, 2016

12._POUND_10_/B GC-01-115-6-12

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

13._POUND_10_/B GC-01-115-6-12

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

14._POUND_10_/B GC-01-115-6-12

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

15._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

16._POUND_10_/B GC-08-163-4-06

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

17._POUND_10_/B GC-08-163-4-06

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

18._POUND_10

identical
39 shared markers

 View  View all  Clone  Any
Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P11 1146
 Dapeng Zhang, 2016

19._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F429 T13
 Dapeng Zhang, 2016

20._EET_400_[ECU]

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1402 10 > F
 Dapeng Zhang, 2016

21._EET_400_[ECU] GC-01-066-4-02

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP2
 Mars, 2018

22._POUND_10_/B

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 9
 Dapeng Zhang, 2016

23._POUND_10_/B GC-01-115-6-12

identical
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

24._POUND_10_/B RUQ_1618

identical
24 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

25._EET_400_[ECU]

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1402 5
 Dapeng Zhang, 2016

26._EET_400_[ECU] GC-01-066-4-02

98.7 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

27._POUND_10_/B RUQ_1618

98.7 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1270 7TcSNP1253 8TcSNP1165 9TcSNP1144 10TcSNP1075
11TcSNP1062 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP872 20TcSNP723
21TcSNP645 22TcSNP619 23TcSNP591 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25