SNP Profiles matching POUND 4 /A

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AG	GG	TT	CT	CC	TT	GT	CT	CC	AT	GG	CC	AA
1._POUND_12_/A___	__	AG	GG	TT	__	__	__	GT	__	__	__	__	CC	AA
2._HUALLAGA_39___	CC	AG	GG	TT	CT	CC	TT	GT	CT	CC	AT	GG	CC	AA
3._HUALLAGA_39___	CC	AG	GG	TT	CT	CC	TT	GT	CT	CC	AT	GG	CC	AA
4._U_17_[PER]___	CC	GG	GG	TT	CT	CC	TT	GT	CT	CC	AT	GG	CC	AA
5._U_17_[PER]___	CC	GG	GG	TT	CT	CC	TT	GT	CT	CC	AT	GG	CC	AA
6._U_17_[PER]___	CC	GG	GG	TT	CT	CC	TT	GT	CT	CC	AT	GG	CC	AA
7._U_17_[PER]___	CC	GG	GG	TT	CT	CC	TT	GT	CT	CC	AT	GG	CC	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	AA	GG	CT	TT	CG	GT	AA	CC	AC	CG	GG	CC	AC
1._POUND_12_/A___	__	__	__	__	TT	CG	__	__	CC	AC	CC	GG	CC	AC
2._HUALLAGA_39___	CC	AA	GG	CT	TT	GG	GT	AA	CC	AC	__	GG	CC	AC
3._HUALLAGA_39___	CC	AA	GG	CT	TT	GG	GT	AA	CC	AC	__	GG	CC	AC
4._U_17_[PER]___	CC	AA	GG	CC	TT	CC	GT	AA	CC	AC	__	GG	CC	AC
5._U_17_[PER]___	CC	AA	GG	CC	TT	CC	GT	AA	CC	AC	__	GG	CC	AC
6._U_17_[PER]___	CC	AA	GG	CC	TT	CC	GT	AA	CC	AC	__	GG	CC	AC
7._U_17_[PER]___	CC	AA	GG	CC	TT	CC	GT	AA	CC	AC	__	GG	CC	AC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	AG	AA	CT	AA	CG	AC	CT	GG	CC	TT	GG	X_X	X_X
1._POUND_12_/A___	AA	__	AA	CT	AA	CG	AC	CT	GG	CC	__	__	X_X	X_X
2._HUALLAGA_39___	AA	AG	AA	CT	AA	CG	AA	TT	GG	CC	TT	GG	X_X	X_X
3._HUALLAGA_39___	AA	AG	AA	CT	AA	CG	AA	TT	GG	CC	TT	GG	X_X	X_X
4._U_17_[PER]___	AA	AG	AA	CT	AA	CG	__	CT	GG	CC	TT	GG	X_X	X_X
5._U_17_[PER]___	AA	AG	AA	CT	AA	CG	__	CT	GG	CC	TT	GG	X_X	X_X
6._U_17_[PER]___	__	AG	AA	CT	AA	CG	__	CT	GG	CC	TT	GG	X_X	X_X
7._U_17_[PER]___	AA	AG	AA	CT	AA	CG	AA	CT	GG	CC	TT	GG	X_X	X_X

Input profile: POUND_4_/A

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F411 T15

Dapeng Zhang, 2016

1._POUND_12_/A RUQ_1458

97.8 %
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._HUALLAGA_39

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8916 2

Dapeng Zhang, 2016

3._HUALLAGA_39 NA

96.2 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

4._U_17_[PER] GC-08-186-4-29

96.1 %
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

Mars, 2018

5._U_17_[PER] GC-08-186-4-29

96.1 %
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

6._U_17_[PER] GC-08-186-4-29

95.9 %
37 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

7._U_17_[PER] GC-08-186-4-29

94.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

Mars, 2018

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25

SNP Profiles matching POUND 4 /A

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Input profile: POUND_4_/A

1._POUND_12_/A RUQ_1458

97.8 % 23 shared markers

2._HUALLAGA_39

96.2 % 39 shared markers

3._HUALLAGA_39 NA

96.2 % 39 shared markers

4._U_17_[PER] GC-08-186-4-29

96.1 % 38 shared markers

5._U_17_[PER] GC-08-186-4-29

96.1 % 38 shared markers

6._U_17_[PER] GC-08-186-4-29

95.9 % 37 shared markers

7._U_17_[PER] GC-08-186-4-29

94.9 % 39 shared markers

97.8 %
23 shared markers

96.2 %
39 shared markers

96.2 %
39 shared markers

96.1 %
38 shared markers

96.1 %
38 shared markers

95.9 %
37 shared markers

94.9 %
39 shared markers