SNP Profiles matching OC 61 [VEN]

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
1._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
2._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
3._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
4._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
5._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
6._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
7._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
8._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
9._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
10._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
11._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
12._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
13._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
14._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
15._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
16._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
17._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
18._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
19._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
20._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
21._SLC_24___	GG	AT	AC	GT	__	AA	CC	AG	CC	AT	GG	AA	CC	TT
22._SLC_24___	GG	AT	AC	GT	CT	AA	CC	AG	CC	AT	GG	AA	CC	TT
23._SLC_24___	GG	AT	AC	GT	__	AA	CC	AG	CC	AT	GG	AA	CC	TT
24._MARPER_45___	__	AT	__	GT	__	__	__	AG	CT	__	GG	AG	CC	TT
25._MARPER_55___	__	AT	__	GG	__	__	__	AA	CC	__	GG	AG	CC	CT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
1._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
2._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
3._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
4._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
5._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
6._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
7._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
8._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
9._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
10._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
11._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
12._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
13._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
14._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
15._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
16._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
17._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
18._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
19._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
20._SLC_24___	GT	CC	CC	CT	TT	CG	CC	__	GG	AA	TT	AG	CT	AA
21._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
22._SLC_24___	GT	CC	CC	CT	TT	CG	CC	__	GG	AA	TT	AG	CT	AA
23._SLC_24___	GT	CC	CC	CT	TT	CG	CC	TT	GG	AA	TT	AG	CT	AA
24._MARPER_45___	__	CC	__	TT	GT	__	CC	__	GG	AA	TT	AG	__	AA
25._MARPER_55___	__	CC	__	CT	GT	__	CC	__	GG	AA	TT	AG	__	AA

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
1._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
2._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
3._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
4._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
5._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
6._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
7._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
8._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
9._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
10._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
11._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
12._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
13._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
14._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
15._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
16._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
17._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
18._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
19._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
20._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
21._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
22._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
23._SLC_24___	AA	TT	CT	GT	CC	AA	TT	CT	GG	AA	TT	X_X	X_X	X_X
24._MARPER_45___	AA	__	CT	__	CC	AA	__	CT	GG	AA	TT	X_X	X_X	X_X
25._MARPER_55___	AA	__	CT	__	CC	AA	__	CT	GG	AA	TT	X_X	X_X	X_X

Input profile: SLC_24

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 7

Dapeng Zhang, 2016

1._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 6

Dapeng Zhang, 2016

2._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 8

Dapeng Zhang, 2016

3._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 9

Dapeng Zhang, 2016

4._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 10

Dapeng Zhang, 2016

5._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 12

Dapeng Zhang, 2016

6._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 14

Dapeng Zhang, 2016

7._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 18

Dapeng Zhang, 2016

8._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 2 > FP

Dapeng Zhang, 2016

9._SLC_24

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 5 > FP

Dapeng Zhang, 2016

10._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

11._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5 > FP4

12._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

13._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

14._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

15._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

16._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

17._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

18._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14

19._SLC_24 GC-08-093-2-16

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 18

Notes: 18

20._SLC_24

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 16

Dapeng Zhang, 2016

21._SLC_24

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8216 17

Dapeng Zhang, 2016

22._SLC_24 GC-08-093-2-16

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

23._SLC_24 GC-08-093-2-16

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 17

Notes: 17

24._MARPER_45

92 %
25 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 251A

Dapeng Zhang, 2014

25._MARPER_55

90 %
25 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER C 249

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP226	8	TcSNP230	9	TcSNP242	10	TcSNP372
11	TcSNP429	12	TcSNP469	13	TcSNP529	14	TcSNP534	15	TcSNP560
16	TcSNP577	17	TcSNP591	18	TcSNP619	19	TcSNP723	20	TcSNP872
21	TcSNP891	22	TcSNP917	23	TcSNP929	24	TcSNP953	25	TcSNP994
26	TcSNP998	27	TcSNP1060	28	TcSNP1062	29	TcSNP1075	30	TcSNP1144
31	TcSNP1165	32	TcSNP1253	33	TcSNP1270	34	TcSNP1350	35	TcSNP1414
36	TcSNP1442	37	TcSNP1458	38	TcSNP1484	39	TcSNP1520