SNP Profiles matching VB 663

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 1234567891011121314
_Input profile
CCAACCGTCTCCCCAACCATAGAGAACC
1._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
2._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
3._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
4._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
5._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
6._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
7._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
8._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
9._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
10._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
11._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
12._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
13._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
14._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
15._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
16._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
17._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
18._VB_663
CCAACCGTCTCCCCAACCATAGAGAACC
19._GC-04-011-1-11
CCAACCGTCTCCCCAACCATAGAGAACC
20._GC-04-011-1-11
CCAACCGTCTCCCCAACCATAGAGAACC
21._GC-04-011-1-11
CCAACCGTCTCCCCAACCATAGAGAACC
22._GC-04-011-1-11
CCAACCGTCTCCCCAACCATAGAGAACC
23._GC-04-011-1-11
CCAACCGTCTCCCCAACCATAGAGAACC
24._GC-04-011-1-11
CCAACCGTCTCCCCAACCATAGAGAACC
25._GC-04-012-1-12
CCAACCGTCTCCCCAACCATAGAGAACC
26._GC-04-012-1-12
CCAACCGTCTCCCCAACCATAGAGAACC
27._GC-04-012-1-12
CCAACCGTCTCCCCAACCATAGAGAACC
28._GC-04-012-1-12
CCAACCGTCTCCCCAACCATAGAGAACC
29._GC-04-012-1-12
CCAACCGTCTCCCCAACCATAGAGAACC
30._GC-04-012-1-12
CCAACCGTCTCCCCAACCATAGAGAACC
31._GC-04-012-1-12
CCAACCGTCTCCCCAACCATAGAGAACC
32._GC-08-108-3-07
CCAACCGTCTCCCCAACCATAGAGAACC
33._GC-08-108-3-07
CCAACCGTCTCCCCAACCATAGAGAACC
34._GC-08-108-3-07
CCAACCGTCTCCCCAACCATAGAGAACC
35._GC-08-108-3-07
CCAACCGTCTCCCCAACCATAGAGAACC
36._GC-08-108-3-07
CCAACCGTCTCCCCAACCATAGAGAACC
37._GC-08-108-3-07
CCAACCGTCTCCCCAACCATAGAGAACC
38._VB_663
CCAACCGTCT_CCAACCATAGAGAACC
39._GC-04-012-1-12
CCAACCGTCT_CCAACCATAGAGAACC
40._RUQ_1036
__CCGTCTCCCCAACCAT_AGAACC
41._RUQ_1036
CCAACCGTCTCCCCAACCATAGAGAACC
 1516171819202122232425262728
_Input profile
GTCCCCCTAAGTCGCTCTCGATCTAATT
1._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
2._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
3._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
4._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
5._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
6._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
7._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
8._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
9._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
10._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
11._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
12._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
13._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
14._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
15._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
16._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
17._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
18._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
19._GC-04-011-1-11
GTCCCCCTAAGTCGCTCTCGATCTAATT
20._GC-04-011-1-11
GTCCCCCTAAGTCGCTCTCGATCTAATT
21._GC-04-011-1-11
GTCCCCCTAAGTCGCTCTCGATCTAATT
22._GC-04-011-1-11
GTCCCCCTAAGTCGCTCTCGATCTAATT
23._GC-04-011-1-11
GTCCCCCTAAGTCGCTCTCGATCTAATT
24._GC-04-011-1-11
GTCCCCCTAAGTCGCTCTCGATCTAATT
25._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
26._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
27._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
28._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
29._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
30._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
31._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
32._GC-08-108-3-07
GTCCCCCTAAGTCGCTCTCGATCTAATT
33._GC-08-108-3-07
GTCCCCCTAAGTCGCTCTCGATCTAATT
34._GC-08-108-3-07
GTCCCCCTAAGTCGCTCTCGATCTAATT
35._GC-08-108-3-07
GTCCCCCTAAGTCGCTCTCGATCTAATT
36._GC-08-108-3-07
GTCCCCCTAAGTCGCTCTCGATCTAATT
37._GC-08-108-3-07
GTCCCCCTAAGTCGCTCTCGATCTAATT
38._VB_663
GTCCCCCTAAGTCGCTCTCGATCTAATT
39._GC-04-012-1-12
GTCCCCCTAAGTCGCTCTCGATCTAATT
40._RUQ_1036
GTCCCCCT_GTCGCT____AATT
41._RUQ_1036
GTCCCCCTAAGTCGCTCTCGATCTAATT
 293031323334353637383940  
_Input profile
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
1._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
2._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
3._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
4._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
5._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
6._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
7._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
8._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
9._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
10._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
11._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
12._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
13._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
14._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
15._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
16._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
17._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
18._VB_663
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
19._GC-04-011-1-11
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
20._GC-04-011-1-11
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
21._GC-04-011-1-11
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
22._GC-04-011-1-11
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
23._GC-04-011-1-11
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
24._GC-04-011-1-11
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
25._GC-04-012-1-12
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
26._GC-04-012-1-12
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
27._GC-04-012-1-12
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
28._GC-04-012-1-12
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
29._GC-04-012-1-12
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
30._GC-04-012-1-12
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
31._GC-04-012-1-12
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
32._GC-08-108-3-07
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
33._GC-08-108-3-07
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
34._GC-08-108-3-07
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
35._GC-08-108-3-07
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
36._GC-08-108-3-07
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
37._GC-08-108-3-07
GGTTCTCTGTCTACCCCCCGAACCX_XX_X
38._VB_663
GGTTCTCTGT_ACCCCCCGAACCX_XX_X
39._GC-04-012-1-12
GGTTCTCTGT_ACCCCCCGAACCX_XX_X
40._RUQ_1036
____GT___CCCGAA_X_XX_X
41._RUQ_1036
GGTTCTCTGTCTACCCCCCGAGCCX_XX_X

Input profile: VB_663

 
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Mars Center for Cocoa Science, Brazil
Location: 8307 8
 Dapeng Zhang, 2016

1._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4111 5
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

2._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4111 7
 Dapeng Zhang, 2016

3._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4111 8
 Dapeng Zhang, 2016

4._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4111 1 > FP
 Dapeng Zhang, 2016

5._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4111 3 > FP
 Dapeng Zhang, 2016

6._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4111 4 > FP
 Dapeng Zhang, 2016

7._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 1
 Dapeng Zhang, 2016

8._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 2
 Dapeng Zhang, 2016

9._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 3
 Dapeng Zhang, 2016

10._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 5
 Dapeng Zhang, 2016

11._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 6
 Dapeng Zhang, 2016

12._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 8
 Dapeng Zhang, 2016

13._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 7 > FP
 Dapeng Zhang, 2016

14._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8307 2
 Dapeng Zhang, 2016

15._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8307 3
 Dapeng Zhang, 2016

16._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8307 5
 Dapeng Zhang, 2016

17._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8307 6
 Dapeng Zhang, 2016

18._VB_663

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8307 9
 Dapeng Zhang, 2016

19._VB_663 GC-04-011-1-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

20._VB_663 GC-04-011-1-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

21._VB_663 GC-04-011-1-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP4
 Mars, 2018

22._VB_663 GC-04-011-1-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

23._VB_663 GC-04-011-1-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

24._VB_663 GC-04-011-1-11

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

25._VB_663 GC-04-012-1-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

26._VB_663 GC-04-012-1-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

27._VB_663 GC-04-012-1-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

28._VB_663 GC-04-012-1-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

29._VB_663 GC-04-012-1-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

30._VB_663 GC-04-012-1-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP3
 Mars, 2018

31._VB_663 GC-04-012-1-12

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

32._VB_663 GC-08-108-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

33._VB_663 GC-08-108-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

34._VB_663 GC-08-108-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

35._VB_663 GC-08-108-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

36._VB_663 GC-08-108-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

37._VB_663 GC-08-108-3-07

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

38._VB_663

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4112 4
 Dapeng Zhang, 2016

39._VB_663 GC-04-012-1-12

identical
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

40._VB_663 RUQ_1036

identical
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

41._VB_663 RUQ_1036

98.8 %
40 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP226 8TcSNP230 9TcSNP242 10TcSNP372
11TcSNP429 12TcSNP469 13TcSNP529 14TcSNP534 15TcSNP560
16TcSNP577 17TcSNP591 18TcSNP619 19TcSNP645 20TcSNP723
21TcSNP872 22TcSNP891 23TcSNP917 24TcSNP929 25TcSNP953
26TcSNP994 27TcSNP998 28TcSNP1060 29TcSNP1062 30TcSNP1075
31TcSNP1144 32TcSNP1165 33TcSNP1253 34TcSNP1270 35TcSNP1350
36TcSNP1414 37TcSNP1442 38TcSNP1458 39TcSNP1484 40TcSNP1520