SNP Profiles matching B 12 /1 [POU]

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_Input profile	CC	GG	CG	CT	TT	CC	CC	GT	TT	CC	TT	AG	CC	AG
1._B_12_/1_[POU]___	CC	GG	CG	CT	TT	CC	CC	GT	TT	CC	TT	AG	CC	AG
2._B_12_/1_[POU]___	CC	GG	CG	CT	TT	CC	CC	GT	TT	CC	TT	AG	CC	AG
3._B_12_/1_[POU]___	CC	GG	CG	CT	TT	CC	CC	GT	TT	CC	TT	AG	CC	AG
4._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
5._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
6._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
7._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
8._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
9._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
10._PA_121_[PER]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
11._PA_121_[PER]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
12._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
13._B_12_/1_[POU]___	CC	GG	CG	CT	TT	__	CC	GT	TT	CC	TT	AG	CC	AG
14._B_12_/1_[POU]___	__	GG	CG	CT	__	__	__	GT	__	__	__	__	CC	AG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CT	AA	GG	CT	CT	GG	GT	AA	CC	CC	GG	GT	CT	CC
1._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
2._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
3._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
4._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
5._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
6._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
7._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
8._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
9._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
10._PA_121_[PER]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
11._PA_121_[PER]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
12._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
13._B_12_/1_[POU]___	CT	AA	GG	CT	TT	GG	GT	AA	CC	CC	GG	GT	CT	CC
14._B_12_/1_[POU]___	__	__	__	__	TT	GG	GT	__	CC	CC	GG	GT	CT	CC

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_Input profile	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
1._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
2._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
3._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
4._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
5._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
6._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
7._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
8._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
9._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
10._PA_121_[PER]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
11._PA_121_[PER]___	AA	AG	TT	CC	AA	CC	AA	CT	GT	CC	AA	GG	X_X	X_X
12._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	__	GT	CC	AA	GG	X_X	X_X
13._B_12_/1_[POU]___	AA	AG	TT	CC	AA	CC	AA	__	GT	CC	AA	GG	X_X	X_X
14._B_12_/1_[POU]___	AA	__	TT	CC	AA	CC	AA	CT	GT	CC	__	__	X_X	X_X

Input profile: B_12_/1_[POU] RUQ_1541

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

1._B_12_/1_[POU]

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 2

Dapeng Zhang, 2016

2._B_12_/1_[POU] GC-05-093-2-44

98.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

3._B_12_/1_[POU]

98.8 %
40 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F461 T10

Dapeng Zhang, 2016

4._B_12_/1_[POU]

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 1 > FP

Dapeng Zhang, 2016

5._B_12_/1_[POU]

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 5

Dapeng Zhang, 2016

6._B_12_/1_[POU]

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 4

Dapeng Zhang, 2016

7._B_12_/1_[POU] GC-05-093-2-44

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

8._B_12_/1_[POU] GC-05-093-2-44

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

9._B_12_/1_[POU] GC-05-093-2-44

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

10._PA_121_[PER]

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5111 2 > FP

Dapeng Zhang, 2016

11._PA_121_[PER] GC-05-011-1-11

98.7 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP4

12._B_12_/1_[POU]

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 5244 3

Dapeng Zhang, 2016

13._B_12_/1_[POU] GC-05-093-2-44

98.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

14._B_12_/1_[POU] RUQ_1541

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25