SNP Profiles matching CCN 51

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTAGGGTTTTACCTTTCCCTAACTAATT
1._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
2._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
3._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
4._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
5._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
6._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
7._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
8._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
9._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
10._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
11._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
12._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
13._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
14._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
15._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAATT
16._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAACT
17._CCN_51___
CTAGGGTTTTACCTTTCCCTAACTAACT
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AAGGCTCCGGAGCTCCTTCTACAGGGAA
1._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
2._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
3._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
4._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
5._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
6._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
7._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
8._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
9._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
10._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
11._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
12._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
13._CCN_51___
AA__CTCCGGAGCTCCTTCTACAGGGAA
14._CCN_51___
AA__CTCCGGAGCTCCTTCTACAGGGAA
15._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
16._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
17._CCN_51___
AAGGCTCCGGAGCTCCTTCTACAGGGAA
 29 30 31 32 33 34 35 36 37      
_Input profile
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
1._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
2._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
3._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
4._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
5._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
6._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
7._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
8._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
9._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
10._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
11._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
12._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
13._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
14._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
15._CCN_51___
CTAA__AACCTTACTTGGX_XX_XX_XX_XX_X
16._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X
17._CCN_51___
CTAACGAACCTTACTTGGX_XX_XX_XX_XX_X

Input profile: CCN_51

 
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Mars Center for Cocoa Science, Brazil
Location: 7121 6 > FP
 Dapeng Zhang, 2016

1._CCN_51

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7121 3 > FP
 Dapeng Zhang, 2016

2._CCN_51

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7121 14
 Dapeng Zhang, 2016

3._CCN_51

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7121 13
 Dapeng Zhang, 2016

4._CCN_51

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7121 12
 Dapeng Zhang, 2016

5._CCN_51

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7121 10
 Dapeng Zhang, 2016

6._CCN_51 GC-07-019-1-21

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 7, Block: 1, Rep: 21, Tree: PL3
Notes: PL3 FP1
 Mars, 2018

7._CCN_51 GC-07-019-1-21

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 7, Block: 1, Rep: 21, Tree: PL6
Notes: PL6 FP4
 Mars, 2018

8._CCN_51 GC-07-019-1-21

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
 Mars, 2018

9._CCN_51 GC-07-019-1-21

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
 Mars, 2018

10._CCN_51 GC-07-019-1-21

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
 Mars, 2018

11._CCN_51 GC-07-019-1-21

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 14
 Mars, 2018

12._CCN_51

identical
37 shared markers

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Estation Experimental Tropical Pichilingue, Ecuador
 Dapeng Zhang, 2016

13._CCN_51

identical
36 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 7121 4 > FP
 Dapeng Zhang, 2016

14._CCN_51 GC-07-019-1-21

identical
36 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 7, Block: 1, Rep: 21, Tree: PL4
Notes: PL4 FP2
 Mars, 2018

15._CCN_51 GC-06-4-1-04

identical
36 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Field: 6, Block: 1, Rep: 4, Tree: PL7
Notes: PL7 FP
 Mars, 2018

16._CCN_51

98.6 %
37 shared markers

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USAPEN
 Dapeng Zhang, 2016

17._CCN_51

98.6 %
37 shared markers

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USASPC
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1060 13TcSNP998 14TcSNP994 15TcSNP953
16TcSNP929 17TcSNP917 18TcSNP891 19TcSNP723 20TcSNP645
21TcSNP619 22TcSNP577 23TcSNP560 24TcSNP534 25TcSNP529
26TcSNP469 27TcSNP429 28TcSNP372 29TcSNP242 30TcSNP230
31TcSNP226 32TcSNP193 33TcSNP151 34TcSNP150 35TcSNP144
36TcSNP32 37TcSNP25