SNP Profiles matching EET 233

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
1._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
2._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
3._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
4._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
5._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
6._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
7._GC-05-085-2-36	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
8._GC-05-085-2-36	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
9._GC-05-085-2-36	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
10._GC-05-149-4-02	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
11._GC-05-178-4-31	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
12._GC-05-178-4-31	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
13._GC-05-178-4-31	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
14._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
15._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
16._EET_233_[ECU]	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
17._GC-05-085-2-36	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
18._GC-05-085-2-36	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
19._GC-05-149-4-02	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CC	AG	TT	AT
20._RUQ_1517	CT	GG	CC	CT	CC	CT	TT	CC	TT	GG	CT	AG	TT	AT
21._RUQ_1517	_	GG	CC	CT	_	_	_	_	_	_	CC	AG	_	_
22._RUQ_1438	_	GG	CG	CT	_	_	_	_	_	_	CC	AG	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
1._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
2._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
3._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
4._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
5._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
6._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
7._GC-05-085-2-36	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
8._GC-05-085-2-36	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
9._GC-05-085-2-36	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
10._GC-05-149-4-02	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
11._GC-05-178-4-31	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
12._GC-05-178-4-31	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
13._GC-05-178-4-31	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
14._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
15._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
16._EET_233_[ECU]	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
17._GC-05-085-2-36	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
18._GC-05-085-2-36	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
19._GC-05-149-4-02	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
20._RUQ_1517	GG	CC	TT	GG	GG	AA	CT	CC	CG	GT	CT	AC	AG	AG
21._RUQ_1517	_	_	TT	GG	GG	_	CT	CC	GG	GT	CT	AC	AG	_
22._RUQ_1438	_	_	TT	GG	GG	_	CT	CC	CG	GT	CT	AC	AG	_

	29	30	31	32	33	34	35	36	37	38
_Input profile	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
1._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
2._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
3._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
4._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
5._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
6._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
7._GC-05-085-2-36	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
8._GC-05-085-2-36	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
9._GC-05-085-2-36	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
10._GC-05-149-4-02	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
11._GC-05-178-4-31	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
12._GC-05-178-4-31	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
13._GC-05-178-4-31	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
14._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	CC	_	CC	X_X	X_X	X_X	X_X
15._EET_233_[ECU]	TT	CC	_	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
16._EET_233_[ECU]	TT	CC	AA	CC	CC	CT	GT	_	AA	CC	X_X	X_X	X_X	X_X
17._GC-05-085-2-36	TT	CC	AA	CC	CC	CT	GT	_	AA	CC	X_X	X_X	X_X	X_X
18._GC-05-085-2-36	TT	CC	_	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
19._GC-05-149-4-02	TT	CC	AA	CC	CC	CT	GT	CC	_	CC	X_X	X_X	X_X	X_X
20._RUQ_1517	TT	CC	AA	CC	CC	CT	GT	CC	AA	CC	X_X	X_X	X_X	X_X
21._RUQ_1517	TT	CC	AA	CC	CC	CT	GT	CC	_	_	X_X	X_X	X_X	X_X
22._RUQ_1438	TT	CC	AA	CC	CC	TT	GT	CC	_	_	X_X	X_X	X_X	X_X

Input profile: EET_233_[ECU]

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5236 1 > FP

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

1._EET_233_[ECU]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5431 3 > FP

Dapeng Zhang, 2016

2._EET_233_[ECU]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5431 5

Dapeng Zhang, 2016

3._EET_233_[ECU]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5431 4

Dapeng Zhang, 2016

4._EET_233_[ECU]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5402 1 > FP

Dapeng Zhang, 2016

5._EET_233_[ECU]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5236 4

Dapeng Zhang, 2016

6._EET_233_[ECU]

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5236 2 > FP

Dapeng Zhang, 2016

7._EET_233_[ECU] GC-05-085-2-36

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL1

Notes: PL1 FP1

8._EET_233_[ECU] GC-05-085-2-36

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL2

Notes: PL2 FP2

9._EET_233_[ECU] GC-05-085-2-36

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

10._EET_233_[ECU] GC-05-149-4-02

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP2

11._EET_233_[ECU] GC-05-178-4-31

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP2

12._EET_233_[ECU] GC-05-178-4-31

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

13._EET_233_[ECU] GC-05-178-4-31

identical
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

14._EET_233_[ECU]

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5402 2

Dapeng Zhang, 2016

15._EET_233_[ECU]

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5236 5 > FP

Dapeng Zhang, 2016

16._EET_233_[ECU]

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5236 3 > FP

Dapeng Zhang, 2016

17._EET_233_[ECU] GC-05-085-2-36

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL3

Notes: PL3 FP3

18._EET_233_[ECU] GC-05-085-2-36

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 5, Block: 2, Rep: 36, Tree: PL5

Notes: PL5 FP4

19._EET_233_[ECU] GC-05-149-4-02

identical
37 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

20._EET_233_[ECU] RUQ_1517

98.7 %
38 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

21._EET_233_[ECU] RUQ_1517

97.8 %
23 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

22._SJ_1_/40_[POU] RUQ_1438

95.7 %
23 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1270	7	TcSNP1165	8	TcSNP1144	9	TcSNP1075	10	TcSNP1062
11	TcSNP1060	12	TcSNP998	13	TcSNP994	14	TcSNP953	15	TcSNP929
16	TcSNP917	17	TcSNP891	18	TcSNP872	19	TcSNP723	20	TcSNP645
21	TcSNP619	22	TcSNP591	23	TcSNP577	24	TcSNP560	25	TcSNP534
26	TcSNP529	27	TcSNP469	28	TcSNP429	29	TcSNP372	30	TcSNP242
31	TcSNP230	32	TcSNP226	33	TcSNP193	34	TcSNP151	35	TcSNP150
36	TcSNP144	37	TcSNP32	38	TcSNP25