SNP Profiles matching AGU-3339.12/T3

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	CC	CC	AA	GG	CT	CC	TT	AG	CT	TT	CC	TT
1._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	AA	GG	CT	CC	TT	AG	CT	TT	CC	TT
2._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	AA	GG	CT	CC	TT	AG	CT	TT	CC	TT
3._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	AA	GG	CT	CC	TT	AG	CT	TT	CC	TT
4._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	AA	GG	CT	CC	TT	AG	CT	TT	CC	TT
5._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	__	__	__	__	TT	AG	__	TT	__	__
6._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	__	__	__	__	TT	AG	__	TT	__	__
7._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	__	__	__	__	TT	AG	__	TT	__	__
8._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	__	__	__	__	TT	AG	__	TT	__	__
9._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	__	__	__	__	TT	AG	__	TT	__	__
10._AGU_3339_/12_[CHA]___	TT	AA	CC	CC	__	__	__	__	TT	AG	__	TT	__	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	AA	AG	CC	CG	CG	CC	AA	CC	AA	AA	AT	GG	CC
1._AGU_3339_/12_[CHA]___	CC	AA	AG	CC	CG	CG	CC	AA	CC	AA	AA	AT	GG	CC
2._AGU_3339_/12_[CHA]___	CC	AA	AG	CC	CG	CG	CC	AA	CC	AA	AA	AT	GG	CC
3._AGU_3339_/12_[CHA]___	CC	AA	AG	CC	CG	CG	CC	AA	CC	AA	AA	AT	GG	CC
4._AGU_3339_/12_[CHA]___	CC	AA	AG	CC	CG	CG	CC	AA	CC	__	AA	AT	GG	CC
5._AGU_3339_/12_[CHA]___	__	__	AG	__	__	CG	__	__	__	__	AA	AT	__	CC
6._AGU_3339_/12_[CHA]___	__	__	AG	__	__	CG	__	__	__	__	AA	AT	__	CC
7._AGU_3339_/12_[CHA]___	__	__	AG	__	__	CG	__	__	__	__	AA	AT	__	CC
8._AGU_3339_/12_[CHA]___	__	__	AG	__	__	CG	__	__	__	__	AA	AT	__	CC
9._AGU_3339_/12_[CHA]___	__	__	AG	__	__	CG	__	__	__	__	AA	AT	__	CC
10._AGU_3339_/12_[CHA]___	__	__	AG	__	__	CG	__	__	__	__	AA	AT	__	CC

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AT	TT	GT	AG	CG	CC	AA	GT	GG	TT	GG	CT	CG	GG
1._AGU_3339_/12_[CHA]___	AT	TT	GT	AG	CG	CC	AA	GT	GG	TT	GG	CT	CG	GG
2._AGU_3339_/12_[CHA]___	AT	TT	GT	AG	CG	CC	AA	GT	GG	TT	GG	CT	CG	GG
3._AGU_3339_/12_[CHA]___	AT	TT	GT	AG	CG	CC	AA	GT	GG	TT	GG	CT	CG	GG
4._AGU_3339_/12_[CHA]___	AT	TT	GT	AG	CG	CC	AA	GT	GG	TT	GG	CT	CG	GG
5._AGU_3339_/12_[CHA]___	AT	__	__	__	CG	__	AA	GT	__	__	GG	__	__	__
6._AGU_3339_/12_[CHA]___	AT	__	__	__	CG	__	AA	GT	__	__	GG	__	__	__
7._AGU_3339_/12_[CHA]___	AT	__	__	__	CG	__	AA	GT	__	__	GG	__	__	__
8._AGU_3339_/12_[CHA]___	AT	__	__	__	CG	__	AA	GT	__	__	GG	__	__	__
9._AGU_3339_/12_[CHA]___	AT	__	__	__	CG	__	AA	GT	__	__	GG	__	__	__
10._AGU_3339_/12_[CHA]___	AT	__	__	__	CG	__	AA	GT	__	__	GG	__	__	__

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	TT	CT	GG	AA	CT	AC	GG	GG	TT	TT	TT	GG	CC	CT
1._AGU_3339_/12_[CHA]___	TT	CT	GG	AA	CT	AC	GG	GG	TT	TT	TT	GG	CC	CT
2._AGU_3339_/12_[CHA]___	TT	CT	GG	AA	CT	AC	GG	GG	TT	TT	TT	GG	CC	CT
3._AGU_3339_/12_[CHA]___	TT	CT	GG	AA	CT	AC	GG	GG	TT	TT	TT	GG	CC	CT
4._AGU_3339_/12_[CHA]___	TT	CT	GG	AA	CT	AC	GG	GG	__	TT	TT	GG	CC	CT
5._AGU_3339_/12_[CHA]___	__	CT	__	__	__	__	__	__	__	TT	__	__	__	CT
6._AGU_3339_/12_[CHA]___	__	CT	__	__	__	__	__	__	__	TT	__	__	__	CT
7._AGU_3339_/12_[CHA]___	__	CT	__	__	__	__	__	__	__	TT	__	__	__	CT
8._AGU_3339_/12_[CHA]___	__	CT	__	__	__	__	__	__	__	TT	__	__	__	CT
9._AGU_3339_/12_[CHA]___	__	CT	__	__	__	__	__	__	__	TT	__	__	__	CT
10._AGU_3339_/12_[CHA]___	__	CT	__	__	__	__	__	__	__	TT	__	__	__	CT

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	CC	CG	AA	AC	AG	GG	GT	AA	CT	CC	TT	AC	GG	AC
1._AGU_3339_/12_[CHA]___	CC	CG	AA	AC	AG	GG	GT	AA	CT	CC	TT	AC	GG	AC
2._AGU_3339_/12_[CHA]___	CC	CG	AA	AC	AG	GG	GT	AA	CT	CC	TT	AC	GG	AC
3._AGU_3339_/12_[CHA]___	CC	CG	AA	AC	AG	GG	GT	AA	CT	CC	TT	AC	GG	AC
4._AGU_3339_/12_[CHA]___	CC	CG	AA	AC	AG	GG	GT	AA	CT	CC	TT	AC	GG	AC
5._AGU_3339_/12_[CHA]___	CC	CG	__	AC	AG	GG	GT	__	__	__	TT	__	__	__
6._AGU_3339_/12_[CHA]___	CC	CG	__	AC	AG	GG	GT	__	__	__	TT	__	__	__
7._AGU_3339_/12_[CHA]___	CC	CG	__	AC	AG	GG	GT	__	__	__	TT	__	__	__
8._AGU_3339_/12_[CHA]___	CC	CG	__	AC	AG	GG	GT	__	__	__	TT	__	__	__
9._AGU_3339_/12_[CHA]___	CC	CG	__	AC	AG	GG	GT	__	__	__	TT	__	__	__
10._AGU_3339_/12_[CHA]___	CC	CG	__	AC	AG	GG	GT	__	__	__	TT	__	__	__

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
_Input profile	AA	AG	AC	CC	CT	AA	CC	TT	TT	CC	TT	AG	CT	GT
1._AGU_3339_/12_[CHA]___	AA	AG	AC	CC	CT	AA	CC	TT	TT	CC	TT	AG	CT	GT
2._AGU_3339_/12_[CHA]___	AA	AG	AC	CC	CT	AA	CC	TT	TT	CC	TT	AG	CT	GT
3._AGU_3339_/12_[CHA]___	AA	AG	AC	CC	CT	AA	CC	TT	TT	CC	TT	AG	CT	GT
4._AGU_3339_/12_[CHA]___	AA	AG	AC	CC	CT	AA	CC	TT	TT	CC	TT	AG	CT	GT
5._AGU_3339_/12_[CHA]___	__	__	AC	CC	__	__	__	TT	TT	CC	__	AG	__	GT
6._AGU_3339_/12_[CHA]___	__	__	AC	CC	__	__	__	TT	TT	CC	__	AG	__	GT
7._AGU_3339_/12_[CHA]___	__	__	AC	CC	__	__	__	TT	TT	CC	__	AG	__	GT
8._AGU_3339_/12_[CHA]___	__	__	AC	CC	__	__	__	TT	TT	CC	__	AG	__	GT
9._AGU_3339_/12_[CHA]___	__	__	AC	CC	__	__	__	TT	TT	CC	__	AG	__	GT
10._AGU_3339_/12_[CHA]___	__	__	AC	CC	__	__	__	TT	TT	CC	__	AG	__	GT

	85	86	87
_Input profile	CT	AT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._AGU_3339_/12_[CHA]___	CT	AT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._AGU_3339_/12_[CHA]___	CT	AT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._AGU_3339_/12_[CHA]___	CT	AT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._AGU_3339_/12_[CHA]___	CT	AT	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._AGU_3339_/12_[CHA]___	CT	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._AGU_3339_/12_[CHA]___	CT	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._AGU_3339_/12_[CHA]___	CT	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._AGU_3339_/12_[CHA]___	CT	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._AGU_3339_/12_[CHA]___	CT	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._AGU_3339_/12_[CHA]___	CT	__	__	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: AGU_3339_/12_[CHA] GC-05-086-2-37

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

1._AGU_3339_/12_[CHA] GC-05-086-2-37

identical
87 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

2._AGU_3339_/12_[CHA] GC-05-086-2-37

identical
87 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP3

3._AGU_3339_/12_[CHA] GC-05-086-2-37

identical
87 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

4._AGU_3339_/12_[CHA] GC-05-086-2-37

identical
85 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

5._AGU_3339_/12_[CHA]

identical
35 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5237 5

Dapeng Zhang, 2016

6._AGU_3339_/12_[CHA]

identical
35 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5237 4

Dapeng Zhang, 2016

7._AGU_3339_/12_[CHA]

identical
35 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5237 3 > FP

Dapeng Zhang, 2016

8._AGU_3339_/12_[CHA]

identical
35 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5237 2 > FP

Dapeng Zhang, 2016

9._AGU_3339_/12_[CHA]

identical
35 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5237 1 > FP

Dapeng Zhang, 2016

10._AGU_3339_/12_[CHA]

identical
35 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B E280 T2

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1075	2	TcSNP1350	3	TcSNP534	4	TcSNP591	5	TcSNP42
6	TcSNP418	7	TcSNP702	8	TcSNP1096	9	TcSNP1165	10	TcSNP429
11	TcSNP75	12	TcSNP891	13	TcSNP122	14	TcSNP316	15	TcSNP521
16	TcSNP860	17	TcSNP1062	18	TcSNP836	19	TcSNP878	20	TcSNP929
21	TcSNP413	22	TcSNP653	23	TcSNP1149	24	TcSNP174	25	TcSNP32
26	TcSNP372	27	TcSNP448	28	TcSNP872	29	TcSNP953	30	TcSNP1034
31	TcSNP1175	32	TcSNP1111	33	TcSNP577	34	TcSNP90	35	TcSNP998
36	TcSNP150	37	TcSNP28	38	TcSNP751	39	TcSNP1484	40	TcSNP602
41	TcSNP894	42	TcSNP1063	43	TcSNP1126	44	TcSNP1270	45	TcSNP606
46	TcSNP329	47	TcSNP944	48	TcSNP1242	49	TcSNP1383	50	TcSNP547
51	TcSNP1309	52	TcSNP151	53	TcSNP799	54	TcSNP899	55	TcSNP1439
56	TcSNP1442	57	TcSNP193	58	TcSNP25	59	TcSNP364	60	TcSNP144
61	TcSNP230	62	TcSNP560	63	TcSNP723	64	TcSNP731	65	TcSNP701
66	TcSNP1041	67	TcSNP917	68	Tcm003s01336581	69	Tcm003s07402719	70	Tcm001s00947643
71	Tcm006s26664133	72	Tcm002s20575712	73	TcSNP529	74	TcSNP1458	75	TcSNP60
76	TcSNP430	77	TcSNP823	78	TcSNP619	79	TcSNP994	80	TcSNP1144
81	TcSNP1156	82	TcSNP469	83	TcSNP999	84	TcSNP1253	85	TcSNP1414
86	TcSNP154	87	TcSNP240