SNP Profiles matching PA 195 [PER]

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	AC	CC	CC	GG	GG	CT	CC	CC	CC	GG	TT	CC	TT
1._EQX_/O_[CHA]___	AA	AC	CC	CC	__	__	__	__	CC	CC	GG	__	CC	__
2._EET_272_[ECU]___	AA	AC	CC	CC	__	__	__	__	CC	CC	GG	__	CC	__
3._EET_272_[ECU]___	AA	AC	CC	CC	GG	GG	CT	CC	CC	CC	GG	TT	CC	TT
4._MOQ_6_/95___	__	__	CC	CC	__	__	TT	__	CC	__	__	TT	CC	__
5._PA_150_[PER]___	AA	AC	CC	CC	GG	GG	CT	CC	CC	CC	GG	TT	CC	TT
6._PA_150_[PER]___	AA	AC	CC	CC	GG	GG	CT	CC	CC	CC	GG	TT	CC	TT
7._PA_150_[PER]___	AA	AC	CC	CC	GG	GG	CT	CC	CC	CC	GG	TT	CC	TT
8._PA_150_[PER]___	AA	AC	CC	CC	GG	GG	CT	CC	CC	CC	GG	TT	CC	TT
9._EET_272_[ECU]___	AA	AC	CC	CC	GG	GG	CT	CC	CC	CC	GG	TT	CC	TT
10._EET_272_[ECU]___	AA	AC	CC	CC	__	__	__	__	CC	CC	GG	__	CC	__
11._PA_150_[PER]___	AA	AC	CC	CC	__	__	__	__	CC	CC	GG	__	CC	__
12._PA_150_[PER]___	AA	AC	CC	CC	__	__	__	__	CC	CC	GG	__	CC	__
13._PA_150_[PER]___	AA	AC	CC	CC	__	__	__	__	CC	CC	GG	__	CC	__
14._PA_150_[PER]___	AA	AC	CC	CC	__	__	__	__	CC	CC	GG	__	CC	__
15._PA_124_[PER]___	__	__	CC	CC	__	__	CT	__	CC	__	__	TT	CC	__
16._PA_195_[PER]___	__	__	CC	CC	__	__	CT	__	CC	__	__	TT	CC	__
17._PA_195_[PER]___	__	__	CC	CC	__	__	CT	__	CC	__	__	TT	CC	__
18._PA_56_[PER]___	__	__	CT	CC	__	__	CT	__	CC	__	__	TT	CC	__
19._PA_279_[PER]___	__	__	CT	CC	__	__	TT	__	CC	__	__	TT	CC	__

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	AG	CC	CC	CC	TT	AA	TT	GG	AT	AA	CC	GG
1._EQX_/O_[CHA]___	__	__	AG	__	__	CC	__	__	__	__	AT	AA	__	GG
2._EET_272_[ECU]___	__	__	AG	__	__	CC	__	__	__	__	AT	AA	__	GG
3._EET_272_[ECU]___	AA	CC	AG	CG	CC	CC	TT	AA	TT	GG	AT	AA	CC	GG
4._MOQ_6_/95___	__	__	__	__	CC	__	__	__	__	GG	__	AA	CC	GG
5._PA_150_[PER]___	AA	CC	AG	CG	CC	CC	TT	AA	TT	GG	AT	AA	CC	GG
6._PA_150_[PER]___	AA	CC	AG	CG	CC	CC	TT	AA	TT	GG	AT	AA	CC	GG
7._PA_150_[PER]___	AA	CC	AG	CG	CC	CC	TT	AA	TT	GG	AT	AA	CC	GG
8._PA_150_[PER]___	AA	CC	AG	CG	CC	CC	TT	AA	TT	GG	AT	AA	CC	GG
9._EET_272_[ECU]___	AA	CC	AG	CG	CC	CC	TT	AA	TT	GG	AT	AA	CC	GG
10._EET_272_[ECU]___	__	__	AG	__	__	CC	__	__	__	__	AT	AA	__	GG
11._PA_150_[PER]___	__	__	AG	__	__	CC	__	__	__	__	AT	AA	__	GG
12._PA_150_[PER]___	__	__	AG	__	__	CC	__	__	__	__	AT	AA	__	GG
13._PA_150_[PER]___	__	__	AG	__	__	CC	__	__	__	__	AT	AA	__	GG
14._PA_150_[PER]___	__	__	AG	__	__	CC	__	__	__	__	AT	AA	__	GG
15._PA_124_[PER]___	__	__	__	__	CC	__	__	__	__	GG	__	AA	CC	GG
16._PA_195_[PER]___	__	__	__	__	CC	__	__	__	__	GG	__	AA	CC	GG
17._PA_195_[PER]___	__	__	__	__	CC	__	__	__	__	GG	__	AA	CC	GG
18._PA_56_[PER]___	__	__	__	__	CC	__	__	__	__	GG	__	AA	CC	GG
19._PA_279_[PER]___	__	__	__	__	CC	__	__	__	__	GG	__	AA	CC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	TT	GT	GG	CG	CC	GG	GG	TT	GG	CC	AG	CC	GG
1._EQX_/O_[CHA]___	AA	__	__	__	CG	__	GG	__	__	GG	__	__	__	__
2._EET_272_[ECU]___	AA	__	__	__	CG	__	GG	__	__	GG	__	__	__	__
3._EET_272_[ECU]___	AA	TT	GT	GG	CG	CC	GG	GG	TT	GG	CT	AG	CC	GG
4._MOQ_6_/95___	__	__	__	GG	CG	CC	GG	__	__	GG	CT	__	__	GG
5._PA_150_[PER]___	AA	TT	GT	GG	CG	CC	GG	GG	TT	GG	CT	AG	CC	GG
6._PA_150_[PER]___	AA	TT	GT	GG	CG	CC	GG	GG	TT	GG	CT	AG	CC	GG
7._PA_150_[PER]___	AA	TT	GT	GG	CG	CC	GG	GG	TT	GG	CT	AG	CC	GG
8._PA_150_[PER]___	AA	TT	GT	GG	CG	CC	GG	GG	TT	GG	CT	AG	CC	GG
9._EET_272_[ECU]___	AA	TT	GT	GG	CG	CC	GG	GG	TT	GG	CT	AG	CC	GG
10._EET_272_[ECU]___	AA	__	__	__	CG	__	GG	__	__	GG	__	__	__	__
11._PA_150_[PER]___	AA	__	__	__	CG	__	GG	__	__	GG	__	__	__	__
12._PA_150_[PER]___	AA	__	__	__	CG	__	GG	__	__	GG	__	__	__	__
13._PA_150_[PER]___	AA	__	__	__	CG	__	GG	__	__	GG	__	__	__	__
14._PA_150_[PER]___	AA	__	__	__	CG	__	GG	__	__	GG	__	__	__	__
15._PA_124_[PER]___	__	__	__	GG	CG	CC	GG	__	__	GG	TT	__	__	GG
16._PA_195_[PER]___	__	__	__	GG	CG	CC	GG	__	__	GG	TT	__	__	GG
17._PA_195_[PER]___	__	__	__	GG	CG	CC	GG	__	__	GG	TT	__	__	GG
18._PA_56_[PER]___	__	__	__	GG	CG	CC	GG	__	__	GG	TT	__	__	GG
19._PA_279_[PER]___	__	__	__	GG	GG	CC	GG	__	__	GG	CT	__	__	GG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	TT	CC	AA	GG	AA	CC	CC	GG	AA	GG	TT	CC	CC	TT
1._EQX_/O_[CHA]___	__	CC	__	__	__	__	__	__	__	__	__	CC	CC	__
2._EET_272_[ECU]___	__	CT	__	__	__	__	__	__	__	__	__	CC	CT	__
3._EET_272_[ECU]___	TT	CT	AA	GG	AA	CC	CC	GG	AA	GG	TT	CC	CT	TT
4._MOQ_6_/95___	TT	__	__	GG	__	__	__	__	__	__	TT	CC	__	TT
5._PA_150_[PER]___	TT	CT	AA	GG	AA	CC	CC	GG	AA	GG	TT	CC	CT	TT
6._PA_150_[PER]___	TT	CT	AA	GG	AA	CC	CC	GG	AA	GG	TT	CC	CT	TT
7._PA_150_[PER]___	TT	CT	AA	GG	AA	CC	CC	GG	AA	GG	TT	CC	CT	TT
8._PA_150_[PER]___	TT	CT	AA	GG	AA	CC	CC	GG	AA	GG	TT	CC	CT	TT
9._EET_272_[ECU]___	TT	CT	AA	GG	AA	CC	__	GG	AA	GG	TT	CC	CT	TT
10._EET_272_[ECU]___	__	CT	__	__	__	__	__	__	__	__	__	CC	CT	__
11._PA_150_[PER]___	__	CT	__	__	__	__	__	__	__	__	__	CC	CT	__
12._PA_150_[PER]___	__	CT	__	__	__	__	__	__	__	__	__	CC	CT	__
13._PA_150_[PER]___	__	CT	__	__	__	__	__	__	__	__	__	CC	CT	__
14._PA_150_[PER]___	__	CT	__	__	__	__	__	__	__	__	__	CC	CT	__
15._PA_124_[PER]___	TT	__	__	GG	__	__	__	__	__	__	TT	CC	__	TT
16._PA_195_[PER]___	TT	__	__	GG	__	__	__	__	__	__	TT	CC	__	TT
17._PA_195_[PER]___	TT	__	__	GG	__	__	__	__	__	__	TT	CC	__	TT
18._PA_56_[PER]___	TT	__	__	GG	__	__	__	__	__	__	CT	CC	__	TT
19._PA_279_[PER]___	TT	__	__	GG	__	__	__	__	__	__	CT	CT	__	TT

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	GG	CC	CC	CC	CC	GG	GG	CC	AG	GT	GG	AG	TT	CC
1._EQX_/O_[CHA]___	__	CC	__	CC	CC	GG	__	CC	AG	GT	GG	__	__	__
2._EET_272_[ECU]___	__	CC	__	CC	__	GG	__	CC	AG	GT	GG	__	__	__
3._EET_272_[ECU]___	GG	CC	CC	CC	__	GG	GG	CC	AG	GT	GG	AG	TT	CC
4._MOQ_6_/95___	__	CC	CC	CC	AC	__	GG	CC	AG	GT	GG	AG	__	__
5._PA_150_[PER]___	GG	CC	CC	CC	AA	GG	GG	CC	AG	GT	GG	AG	TT	CC
6._PA_150_[PER]___	GG	CC	CC	CC	AA	GG	GG	CC	AG	GT	GG	AG	TT	CC
7._PA_150_[PER]___	GG	CC	CC	CC	AA	GG	GG	CC	AG	GT	GG	AG	TT	CC
8._PA_150_[PER]___	GG	CC	CC	CC	AA	GG	GG	CC	AG	GT	GG	AG	TT	CC
9._EET_272_[ECU]___	GG	CC	CC	CC	AA	GG	GG	CC	AG	GT	GG	AG	TT	CC
10._EET_272_[ECU]___	__	CC	__	CC	AA	GG	__	CC	AG	GT	GG	__	__	__
11._PA_150_[PER]___	__	CC	__	CC	AA	GG	__	CC	AG	GT	GG	__	__	__
12._PA_150_[PER]___	__	CC	__	CC	AA	GG	__	CC	AG	GT	GG	__	__	__
13._PA_150_[PER]___	__	CC	__	CC	AA	GG	__	CC	AG	GT	GG	__	__	__
14._PA_150_[PER]___	__	CC	__	CC	AA	GG	__	CC	AG	GT	GG	__	__	__
15._PA_124_[PER]___	GG	CC	CC	CC	CC	__	GG	AC	GG	GG	GG	AG	__	__
16._PA_195_[PER]___	__	CC	CC	CC	CC	__	GG	AC	GG	GG	GG	AG	__	__
17._PA_195_[PER]___	__	CC	CC	CC	CC	__	GG	AC	GG	GG	GG	AG	__	__
18._PA_56_[PER]___	__	CC	CC	CT	AC	__	GG	CC	AG	GT	GG	AG	__	__
19._PA_279_[PER]___	__	CC	CC	CC	CC	__	GG	CC	GG	GT	GG	AG	__	__

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
_Input profile	AG	CT	CC	AG	AA	CC	AA	AC	GG	CC	TT	AA	TT	CT
1._EQX_/O_[CHA]___	AG	CT	__	__	__	__	__	AC	GG	__	__	__	TT	CT
2._EET_272_[ECU]___	AG	CT	__	__	__	__	__	AC	GG	__	__	__	TT	CT
3._EET_272_[ECU]___	AG	CT	CC	AG	AC	CC	AA	AC	GG	CC	TT	AA	TT	CT
4._MOQ_6_/95___	__	__	__	__	__	__	__	AC	GG	__	__	AA	TT	__
5._PA_150_[PER]___	AG	CT	CC	AG	AC	CC	AA	AC	GG	CC	TT	AA	TT	CT
6._PA_150_[PER]___	AG	CT	CC	AG	AC	CC	AA	AC	GG	CC	TT	AA	TT	CT
7._PA_150_[PER]___	AG	CT	CC	AG	AC	CC	AA	AC	GG	CC	TT	AA	TT	CT
8._PA_150_[PER]___	AG	CT	CC	AG	AC	CC	AA	AC	GG	CC	TT	AA	TT	CT
9._EET_272_[ECU]___	AG	CT	CC	AG	AC	CC	AA	AC	GG	CC	TT	AA	TT	CT
10._EET_272_[ECU]___	AG	CT	__	__	__	__	__	AC	GG	__	__	__	TT	CT
11._PA_150_[PER]___	AG	CT	__	__	__	__	__	AC	GG	__	__	__	TT	CT
12._PA_150_[PER]___	AG	CT	__	__	__	__	__	AC	GG	__	__	__	TT	CT
13._PA_150_[PER]___	AG	CT	__	__	__	__	__	AC	GG	__	__	__	TT	CT
14._PA_150_[PER]___	AG	CT	__	__	__	__	__	AC	GG	__	__	__	TT	CT
15._PA_124_[PER]___	__	__	__	__	__	__	__	AA	CG	__	__	AA	TT	__
16._PA_195_[PER]___	__	__	__	__	__	__	__	AA	CG	__	__	AA	TT	__
17._PA_195_[PER]___	__	__	__	__	__	__	__	AA	CG	__	__	AA	TT	__
18._PA_56_[PER]___	__	__	__	__	__	__	__	AC	CG	__	__	AA	TT	__
19._PA_279_[PER]___	__	__	__	__	__	__	__	AC	GG	__	__	AA	TT	__

	85	86	87	88	89	90	91	92	93
_Input profile	CC	TT	AA	CC	CC	TT	TT	AA	GG	X_X	X_X	X_X	X_X	X_X
1._EQX_/O_[CHA]___	CC	__	AA	__	CC	TT	TT	__	__	X_X	X_X	X_X	X_X	X_X
2._EET_272_[ECU]___	CC	__	AA	__	CC	TT	TT	__	__	X_X	X_X	X_X	X_X	X_X
3._EET_272_[ECU]___	CC	TT	AA	CC	CC	TT	TT	AA	GG	X_X	X_X	X_X	X_X	X_X
4._MOQ_6_/95___	__	__	AA	CC	CC	TT	__	__	__	X_X	X_X	X_X	X_X	X_X
5._PA_150_[PER]___	CC	TT	AA	CC	CC	TT	TT	AA	GG	X_X	X_X	X_X	X_X	X_X
6._PA_150_[PER]___	CC	TT	AA	CC	CC	TT	TT	AA	GG	X_X	X_X	X_X	X_X	X_X
7._PA_150_[PER]___	CC	TT	AA	CC	CC	TT	TT	AA	GG	X_X	X_X	X_X	X_X	X_X
8._PA_150_[PER]___	CC	TT	AA	CC	CC	TT	TT	AA	GG	X_X	X_X	X_X	X_X	X_X
9._EET_272_[ECU]___	CC	TT	AA	CC	CC	TT	TT	AA	GG	X_X	X_X	X_X	X_X	X_X
10._EET_272_[ECU]___	CC	__	AA	__	CC	TT	TT	__	__	X_X	X_X	X_X	X_X	X_X
11._PA_150_[PER]___	CC	__	AA	__	CC	TT	TT	__	__	X_X	X_X	X_X	X_X	X_X
12._PA_150_[PER]___	CC	__	AA	__	CC	TT	TT	__	__	X_X	X_X	X_X	X_X	X_X
13._PA_150_[PER]___	CC	__	AA	__	CC	TT	TT	__	__	X_X	X_X	X_X	X_X	X_X
14._PA_150_[PER]___	CC	__	AA	__	CC	TT	TT	__	__	X_X	X_X	X_X	X_X	X_X
15._PA_124_[PER]___	__	__	AA	CC	CC	TT	__	__	__	X_X	X_X	X_X	X_X	X_X
16._PA_195_[PER]___	__	__	AA	CC	CC	TT	__	__	__	X_X	X_X	X_X	X_X	X_X
17._PA_195_[PER]___	__	__	AA	CC	CC	TT	__	__	__	X_X	X_X	X_X	X_X	X_X
18._PA_56_[PER]___	__	__	AA	CC	CC	TT	__	__	__	X_X	X_X	X_X	X_X	X_X
19._PA_279_[PER]___	__	__	AG	CC	CC	TT	__	__	__	X_X	X_X	X_X	X_X	X_X

Input profile: EQX_/O_[CHA] GC-07-077-4-21

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

1._EQX_/O_[CHA]

identical
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 7421 2

Dapeng Zhang, 2016

2._EET_272_[ECU]

97.4 %
38 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3311 7

Dapeng Zhang, 2016

3._EET_272_[ECU] GC-03-032-3-11

97.3 %
92 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

4._MOQ_6_/95 RUQ_1436

96.3 %
41 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

5._PA_150_[PER] GC-01-034-2-11

96.2 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

6._PA_150_[PER] GC-01-034-2-11

96.2 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

7._PA_150_[PER] GC-01-034-2-11

96.2 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7 > FP4

8._PA_150_[PER] GC-01-034-2-11

96.2 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

9._EET_272_[ECU] GC-03-032-3-11

96.2 %
92 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

10._EET_272_[ECU]

94.9 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 3311 8

Dapeng Zhang, 2016

11._PA_150_[PER]

94.9 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1209 7 > FP

Dapeng Zhang, 2016

12._PA_150_[PER]

94.9 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1209 10

Dapeng Zhang, 2016

13._PA_150_[PER]

94.9 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1209 3

Dapeng Zhang, 2016

14._PA_150_[PER]

94.9 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1209 2

Dapeng Zhang, 2016

15._PA_124_[PER] RUQ_1576

91.7 %
42 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

16._PA_195_[PER] RUQ_1642

91.5 %
41 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

17._PA_195_[PER] RUQ_1642

91.5 %
41 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

18._PA_56_[PER] RUQ_32

91.5 %
41 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

19._PA_279_[PER] RUQ_1119

90.2 %
41 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1075	2	TcSNP1350	3	TcSNP534	4	TcSNP591	5	TcSNP42
6	TcSNP418	7	TcSNP702	8	TcSNP1096	9	TcSNP1060	10	TcSNP1165
11	TcSNP429	12	TcSNP75	13	TcSNP891	14	TcSNP122	15	TcSNP316
16	TcSNP521	17	TcSNP1062	18	TcSNP836	19	TcSNP878	20	TcSNP929
21	TcSNP413	22	TcSNP653	23	TcSNP1149	24	TcSNP174	25	TcSNP32
26	TcSNP372	27	TcSNP448	28	TcSNP872	29	TcSNP953	30	TcSNP1034
31	TcSNP1175	32	TcSNP1111	33	TcSNP577	34	TcSNP90	35	TcSNP150
36	TcSNP28	37	TcSNP751	38	TcSNP1484	39	TcSNP602	40	TcSNP561
41	TcSNP894	42	TcSNP1063	43	TcSNP1126	44	TcSNP1270	45	TcSNP606
46	TcSNP329	47	TcSNP689	48	TcSNP944	49	TcSNP1242	50	TcSNP1383
51	TcSNP547	52	TcSNP776	53	TcSNP1309	54	TcSNP151	55	TcSNP1520
56	TcSNP799	57	TcSNP899	58	TcSNP226	59	TcSNP1439	60	TcSNP1442
61	TcSNP193	62	TcSNP25	63	TcSNP364	64	TcSNP144	65	TcSNP230
66	TcSNP560	67	TcSNP723	68	TcSNP731	69	TcSNP701	70	TcSNP1041
71	TcSNP645	72	TcSNP917	73	Tcm003s01336581	74	Tcm003s07402719	75	Tcm001s00947643
76	Tcm006s26664133	77	Tcm002s20575712	78	TcSNP529	79	TcSNP1458	80	TcSNP60
81	TcSNP430	82	TcSNP823	83	TcSNP619	84	TcSNP994	85	TcSNP1144
86	TcSNP1156	87	TcSNP469	88	TcSNP999	89	TcSNP242	90	TcSNP1253
91	TcSNP1414	92	TcSNP154	93	TcSNP240