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KER 1-L Group Name Theobroma cacao

French Guiana - CIRAD-CP (1994)
Morphological characteristics of the clones held at CIRAD Guyane. Data supplied to ICGD on computer diskette. Dr. Ph. Lachenaud, CIRAD Guyane.

Derivation: river KERinioutou,.
Collected by Lachenaud.
Location: R. Kerinioutou, Oyapock, French Guiana.

Lachenaud, 1993a [LAC93A]. Habit - Tall trees. Leaf- pigmented flush leaves. Fruits - green and Amelonado shaped, similar to PINA. No symptoms of Witches Broom.

Notes: French Guiana - CIRAD-CP, 1994a [GUY94A] Collections made in 1990.

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PEDIGREE DETAILS

Parents:: KER 1 x Unknown

POPULATION

Motamayor, J.C. et al., 2008: 'Guiana' Population; Subgroup: 'Kerindioutou R' Reference

Reference

Motamayor, J.C., Lachenaud, P., da Silva e Mota, J.W., Loor, R., Kuhn, D.N., Brown, J.S. & Schnell, R.J. 2008
Geographic and Genetic Population Differentiation of the Amazonian Chocolate Tree (Theobroma cacao L). PLoS ONE 3(10): e3311. doi:10.1371/journal.pone.0003311
Population SSR
Guiltinan, Mark, 2019: 'Guiana' Population; Reference

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data

GENOME/TRANSCRIPTOME DATA LINKS

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Guiltinan, Mark, 2019

Reference View Associated Data

BioProject: PRJNA558793 NCBI ENA FASTQ

Library Source: Genomic & Transcriptomic

Run: SRR14022534 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX10399141

BioSample: SAMN12500399

SampleName: KER-1L

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000164

Run: SRR9938315 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686808

BioSample: SAMN12500399

SampleName: KER-1L

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000164

Run: SRR9938316 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686807

BioSample: SAMN12500399

SampleName: KER-1L

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000164

Run: SRR9938318 NCBI ENA FASTQ

Library Source: Genomic

Experiment: SRX6686805

BioSample: SAMN12500399

SampleName: KER-1L

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000164

Run: SRR9938251 NCBI ENA FASTQ

Library Source: Transcriptomic

Experiment: SRX6686872

BioSample: SAMN12500399

SampleName: KER-1L

SampleSource: Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica, Tree_ID: P000164

HELD IN

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Costa Rica, Centro Agronómico Tropical de Investigación y Enseñanza (CATIE): List received in 2018 Reference

Reference

Allan Mata 2018
Accession list for the International Cacao Collection at CATIE (IC3). Personal communication.
Notes

Excel file received by email.; • Accession: 21879; - Local Name: KER-1L; - Year of Accession: 2005
France, CIRAD (Centre de Coopération Internationale en Researche Agronomique pour le Développment): List received in 2012 Reference

Reference

Philippe Lachenaud 2012
CIRAD Montpellier Clone List (Excel Spreadsheet). Data supplied to ICGD by email. Dr. Philippe Lachenaud, CIRAD Montpellier, France, January 2012.; • Local Name: KER 1 L
French Guiana, CIRAD (Centre de Coopération Internationale en Researche Agronomique pour le Développment): List received in 2012 Reference

Reference

Philippe Lachenaud 2012
F. Guiana database, CIRAD-CP. Data supplied to ICGD by email. Dr. Philippe Lachenaud, CIRAD Montpellier, France, January 2012.; • Local Name: KER 1-L

DISEASE

Phytophthora: Resistant; Guiltinan, Mark, 2019

Reference

Guiltinan, Mark 2019
Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI
Notes

A project to establish a new scientific approach for use with perennial crop plants to identify candidate loci for disease resistance using Theobroma cacao. Leaf samples were collected from the La Montaña field site at the CATIE field station in Turrialba, Costa Rica. The study focused on four genetic groups (Guiana, Iquitos, Marañon, and Nanay) and variation in resistance to Phytophthora.
Last updated: November, 2022

plantscience.psu.edu/…

Disease Population Accession Data Project Data; Resistant, sp. P. megakarya (Leaf Disc Test).; Note: Described as Very Resistant. Mean of lesion score = 0.60. Population Kerindioutou; Paulin, D. et al., 2008

Reference

Paulin, D., Ducamp, M. & Lachenaud, P. 2008
New sources of resistance to Phytophthora megakarya identified in wild cocoa tree populations of French Guiana. Crop Protection. 27: pp 1143–1147.
Notes

Phytophthora megakarya inoculation used strain NS269 isolated from a pod harvested in West Province, Cameroon (village of Fako). This strain is of mating type A1.

Disease

REFERENCES

French Guiana - CIRAD-CP (1994) Morphological characteristics of the clones held at CIRAD Guyane. Data supplied to ICGD on computer diskette. Dr. Ph. Lachenaud, CIRAD Guyane.

Motamayor, J.C., Lachenaud, P., da Silva e Mota, J.W., Loor, R., Kuhn, D.N., Brown, J.S. & Schnell, R.J. (2008) Geographic and Genetic Population Differentiation of the Amazonian Chocolate Tree (Theobroma cacao L). PLoS ONE 3(10): e3311. doi:10.1371/journal.pone.0003311

Guiltinan, Mark (2019) Theobroma cacao Disease Resistance: Discovery and Functional Characterization of Genes Regulating Plant Immunity in Perennial Crops. NCBI

Allan Mata (2018) Accession list for the International Cacao Collection at CATIE (IC3). Personal communication.

Philippe Lachenaud (2012) CIRAD Montpellier Clone List (Excel Spreadsheet). Data supplied to ICGD by email. Dr. Philippe Lachenaud, CIRAD Montpellier, France, January 2012.

Philippe Lachenaud (2012) F. Guiana database, CIRAD-CP. Data supplied to ICGD by email. Dr. Philippe Lachenaud, CIRAD Montpellier, France, January 2012.

Paulin, D., Ducamp, M. & Lachenaud, P. (2008) New sources of resistance to Phytophthora megakarya identified in wild cocoa tree populations of French Guiana. Crop Protection. 27: pp 1143–1147.