SNP Profiles of BE 10   View Data

 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
1._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
2._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
3._BE 10___
GGGGTTGGCCTTCCTTCCTT___AAGGAA
4._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
5._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
6._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
7._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
8._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
9._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
10._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
11._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
12._BE 10___
GGGGTTGGCCTTCCTTCCTTCCAAGGAA
13._BE 10___
GGCCTTGGGGAACCAACCAAGGTTGGAA
14._BE 10___
GG___TT_______________CCTTCC______AA
15._BE 10___
GG___TT_______________CCTTCC______AA
16._BE 10___
GG___TT_______________CCTTCC______AA
17._BE 10___
GG___TT_______________CCTTCC______AA
18._BE 10___
GG___TT_______________CCTTCC______AA
19._BE 10___
GG___TT_______________CCTTCC______AA
20._BE 10___
GG___TT_______________CCTTCC______AA
21._BE 10___
GG___TT_______________CCTTCC______AA
22._BE 10___
GG___TT_______________CCTTCC______AA
23._BE 10___
GG___TT_______________CCTTCC______AA
24._BE 10___
GG___TT_______________CCTT_________AA
25._BE 10___
GG___TT_______________CCTTCC______AA
26._BE 10___
GG___TT_______________CCTTCC______AA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
1._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
2._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
3._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
4._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
5._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
6._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
7._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
8._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
9._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
10._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
11._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
12._BE 10___
CCAAGGCCAAGGGGAATTGGGGTTCCAA
13._BE 10___
GGAAGGGGTTGGGGAAAAGGGGTTGG___
14._BE 10___
CCAA___CC_________AA______GG______AA
15._BE 10___
CCAA___CC_________AA______GG______AA
16._BE 10___
CCAA___CC_________AA______GG______AA
17._BE 10___
CCAA___CC_________AA______GG______AA
18._BE 10___
CCAA___CC_________AA______GG______AA
19._BE 10___
CCAA___CC_________AA______GG______AA
20._BE 10___
CCAA___CC_________AA______GG______AA
21._BE 10___
CCAA___CC_________AA______GG______AA
22._BE 10___
CCAA___CC_________AA______GG______AA
23._BE 10___
CCAA___CC_________AA______GG______AA
24._BE 10___
CCAA___CC_________AA______GG______AA
25._BE 10___
CCAA___CC_________AA______GG______AA
26._BE 10___
CCAA_______________AA______GG______AA
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
1._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
2._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
3._BE 10___
___CCCCTTGGTTAACCAATT___TTGGAA
4._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
5._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
6._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
7._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
8._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
9._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
10._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
11._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
12._BE 10___
___CCCCTTGGTTAACCAATTAATTGGAA
13._BE 10___
AACCCC___GGAAAACCAAAA___AA___GG
14._BE 10___
______CCTT___TT___CCAA______TTGG___
15._BE 10___
______CCTT___TT___CCAA______TTGG___
16._BE 10___
______CCTT___TT___CCAA______TTGG___
17._BE 10___
______CCTT___TT___CCAA______TTGG___
18._BE 10___
______CCTT___TT___CCAA______TTGG___
19._BE 10___
______CCTT___TT___CCAA______TTGG___
20._BE 10___
______CCTT___TT___CCAA______TTGG___
21._BE 10___
______CCTT___TT___CCAA______TTGG___
22._BE 10___
______CCTT___TT___CCAA______TTGG___
23._BE 10___
______CCTT___TT___CCAA______TTGG___
24._BE 10___
______CCTT___TT___CCAA______TTGG___
25._BE 10___
______CCTT___TT___CCAA______TTGG___
26._BE 10___
_________TT___TT___CCAA______TTAA___
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
1._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
2._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
3._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
4._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
5._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
6._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
7._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
8._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
9._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
10._BE 10___
___TTCCGGGGTTTTTTAAGG___GGCCCC
11._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
12._BE 10___
AATTCCGGGGTTTTTTAAGG___GGCCCC
13._BE 10___
AA______CCGGAAAAAAAACCGGCC___GG
14._BE 10___
_________GG_____________________GG___CC
15._BE 10___
_________GG_____________________GG___CC
16._BE 10___
_________GG_____________________GG___CC
17._BE 10___
_________GG_____________________GG___CC
18._BE 10___
_________GG_____________________GG___CC
19._BE 10___
_________GG_____________________GG___CC
20._BE 10___
_________GG_____________________GG___CC
21._BE 10___
_________GG_____________________GG___CC
22._BE 10___
_________GG_____________________GG___CC
23._BE 10___
_________GG_____________________GG___CC
24._BE 10___
_________GG_____________________GG___CC
25._BE 10___
_________GG_____________________GG___CC
26._BE 10___
_________GG_____________________GG___CC
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
1._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
2._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
3._BE 10___
CCAA___GGCCAATTGGTTTTCCCCAAGG
4._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
5._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
6._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
7._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
8._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
9._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
10._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
11._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
12._BE 10___
CCAATTGGCCAATTGGTTTTCCCCAAGG
13._BE 10___
GGAAAAGGGGAAAAGG___AA___GGAACC
14._BE 10___
______TTGG___AATTGG_________CCAA___
15._BE 10___
______TTGG___AATTGG_________CCAA___
16._BE 10___
______TTGG___AATTGG_________CCAA___
17._BE 10___
______TTGG___AATTGG_________CCAA___
18._BE 10___
______TTGG___AATTGG_________CCAA___
19._BE 10___
______TTGG___AATTGG_________CCAA___
20._BE 10___
______TTGG___AATTGG_________CCAA___
21._BE 10___
______TTGG___AATTGG_________CCAA___
22._BE 10___
______TTGG___AATTGG_________CCAA___
23._BE 10___
______TTGG___AATTGG_________CCAA___
24._BE 10___
_________GG___AATTGG_________CCAA___
25._BE 10___
______TTGG___AATTGG_________CCAA___
26._BE 10___
_______________AATTGG_________CCAA___
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
1._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
2._BE 10___
AACCGGTTTTTTTTCCGGCC___CCTTAA
3._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
4._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
5._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
6._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
7._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
8._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
9._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
10._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
11._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
12._BE 10___
AACCGGTTTTTTTTCCGGCCTTCCTTAA
13._BE 10___
AAGGGG______AAAA___CC___AAGGAAAA
14._BE 10___
AA_________TT______CC______TTCC___AA
15._BE 10___
AA_________TT______CC______TTCC___AA
16._BE 10___
AA_________TT______CC______TTCC___AA
17._BE 10___
AA_________TT______CC______TTCC___AA
18._BE 10___
AA_________TT______CC______TTCC___AA
19._BE 10___
AA_________TT______CC______TTCC___AA
20._BE 10___
AA_________TT______CC______TTCC___AA
21._BE 10___
AA_________TT______CC______TTCC___AA
22._BE 10___
AA_________TT______CC______TTCC___AA
23._BE 10___
AA_________TT______CC_________CC___AA
24._BE 10___
AA_________TT______CC______TTCC___AA
25._BE 10___
AA_________TT______CC______TTCC___AA
26._BE 10___
AA_________TT______CC______TTCC______
 85 86 87 88 89 90 91 92 93 94 95 96   
1._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
2._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
3._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
4._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
5._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
6._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
7._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
8._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
9._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
10._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
11._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
12._BE 10___
GGTTTTCCGGAATTCCAACCAAAAX_XX_X
13._BE 10___
GGAAAAGGCCAAAACC___CCAAAAX_XX_X
14._BE 10___
___TT___CCGGAATT_______________X_XX_X
15._BE 10___
___TT___CCGGAATT_______________X_XX_X
16._BE 10___
___TT___CCGGAATT_______________X_XX_X
17._BE 10___
___TT___CCGGAATT_______________X_XX_X
18._BE 10___
___TT___CCGGAATT_______________X_XX_X
19._BE 10___
___TT___CCGGAATT_______________X_XX_X
20._BE 10___
___TT___CCGGAATT_______________X_XX_X
21._BE 10___
___TT___CCGGAATT_______________X_XX_X
22._BE 10___
___TT___CCGGAATT_______________X_XX_X
23._BE 10___
___TT___CCGGAATT_______________X_XX_X
24._BE 10___
___TT___CCGGAATT_______________X_XX_X
25._BE 10___
___TT___CCGGAATT_______________X_XX_X
26._BE 10___
_________CCGGAATT_______________X_XX_X

 Key

Mars Center for Cocoa Science Brazil

1._BE_10 GC-08-090-2-13

Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._BE_10 GC-08-090-2-13

Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

3._BE_10 GC-08-090-2-13

Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

4._BE_10 GC-08-090-2-13

Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

5._BE_10 GC-08-090-2-13

Location: Tree: 5
Notes: 5
 Mars, 2018

6._BE_10 GC-08-090-2-13

Location: Tree: 6
Notes: 6
 Mars, 2018

7._BE_10 GC-08-090-2-13

Location: Tree: 7
Notes: 7
 Mars, 2018

8._BE_10 GC-08-090-2-13

Location: Tree: 8
Notes: 8
 Mars, 2018

9._BE_10 GC-08-090-2-13

Location: Tree: 9
Notes: 9
 Mars, 2018

10._BE_10 GC-08-090-2-13

Location: Tree: 11
Notes: 11
 Mars, 2018

11._BE_10 GC-08-090-2-13

Location: Tree: 13
Notes: 13
 Mars, 2018

12._BE_10 GC-08-090-2-13

Location: Tree: 14
Notes: 14
 Mars, 2018

13._BE_10 GC-08-90-2-13

Location: Field: Nursery, Block: -, Rep: -, Tree: 5
Notes: MCCS_Structure_refs_above_0.9membership - Sample
 Mars, 2018

14._BE_10

Location: 8213 5
 Dapeng Zhang, 2016

15._BE_10

Location: 8213 6
 Dapeng Zhang, 2016

16._BE_10

Location: 8213 7
 Dapeng Zhang, 2016

17._BE_10

Location: 8213 8
 Dapeng Zhang, 2016

18._BE_10

Location: 8213 9
 Dapeng Zhang, 2016

19._BE_10

Location: 8213 11
 Dapeng Zhang, 2016

20._BE_10

Location: 8213 13
 Dapeng Zhang, 2016

21._BE_10

Location: 8213 14
 Dapeng Zhang, 2016

22._BE_10

Location: 8213 1 > FP
 Dapeng Zhang, 2016

23._BE_10

Location: 8213 2 > FP
 Dapeng Zhang, 2016

24._BE_10

Location: 8213 3 > FP
 Dapeng Zhang, 2016

25._BE_10

Location: 8213 4 > FP
 Dapeng Zhang, 2016

International Cocoa Genebank, Trinidad (ICG,T) Trinidad and Tobago

26._BE_10

Location: 5A N3/467 T1
 Dapeng Zhang, 2016

  Key to SNP Markers

1TcSNP25 2TcSNP28 3TcSNP32 4TcSNP42 5TcSNP60
6TcSNP75 7TcSNP90 8TcSNP122 9TcSNP144 10TcSNP150
11TcSNP151 12TcSNP154 13TcSNP174 14TcSNP193 15TcSNP226
16TcSNP230 17TcSNP240 18TcSNP242 19TcSNP316 20TcSNP329
21TcSNP364 22TcSNP372 23TcSNP413 24TcSNP418 25TcSNP429
26TcSNP430 27TcSNP448 28TcSNP469 29TcSNP497 30TcSNP521
31TcSNP529 32TcSNP534 33TcSNP547 34TcSNP560 35TcSNP561
36TcSNP577 37TcSNP591 38TcSNP602 39TcSNP606 40TcSNP619
41TcSNP645 42TcSNP653 43TcSNP689 44TcSNP701 45TcSNP702
46TcSNP723 47TcSNP731 48TcSNP751 49TcSNP776 50TcSNP799
51TcSNP823 52TcSNP836 53TcSNP860 54TcSNP872 55TcSNP878
56TcSNP891 57TcSNP894 58TcSNP899 59TcSNP917 60TcSNP929
61TcSNP944 62TcSNP953 63TcSNP994 64TcSNP998 65TcSNP999
66TcSNP1034 67TcSNP1041 68TcSNP1060 69TcSNP1062 70TcSNP1063
71TcSNP1075 72TcSNP1096 73TcSNP1111 74TcSNP1126 75TcSNP1144
76TcSNP1149 77TcSNP1156 78TcSNP1165 79TcSNP1175 80TcSNP1242
81TcSNP1253 82TcSNP1270 83TcSNP1309 84TcSNP1350 85TcSNP1383
86TcSNP1414 87TcSNP1439 88TcSNP1442 89TcSNP1458 90TcSNP1484
91TcSNP1520 92Tcm001s00947643 93Tcm002s20575712 94Tcm003s01336581 95Tcm003s07402719
96Tcm006s26664133