SNP Profiles of N 38 [T38]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
TTCCGGGGGGGGTTAATTTTTTAAAACT
1._RUQ_1159
____GG______TT______________
2._RUQ_1159
____CC______AA________AA____
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
TTGGCCAAGGTTAAAATTTTGGGGTTCG
1._RUQ_1159
TTGG____GG____AA____GGGGTT__
2._RUQ_1159
__GG__AACCCC__AA____GGCC____
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AACCAATTTTACTTCCAGTTCCCTAAGG
1._RUQ_1159
________TTAA__CC__________GG
2._RUQ_1159
________AAAC__CC__________GG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
AATTAATTGGCCACTTGGTTCCCCCCTT
1._RUQ_1159
____AA______AC______________
2._RUQ_1159
____AA______AC______________

Input profile: N_38_[T38] RUQ_1159

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

1._N_38_[T38] RUQ_1159

96.7 %
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._N_38_[T38] RUQ_1159

62.5 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP1527 2TcSNP1524 3TcSNP1458 4TcSNP1404 5TcSNP1401
6TcSNP1275 7TcSNP1253 8TcSNP1230 9TcSNP1205 10TcSNP1144
11TcSNP1112 12TcSNP1062 13TcSNP1019 14TcSNP1010 15TcSNP999
16TcSNP998 17TcSNP945 18TcSNP899 19TcSNP872 20TcSNP836
21TcSNP835 22TcSNP823 23TcSNP800 24TcSNP739 25TcSNP731
26TcSNP723 27TcSNP702 28TcSNP660 29TcSNP645 30TcSNP644
31TcSNP642 32TcSNP640 33TcSNP602 34TcSNP591 35TcSNP589
36TcSNP577 37TcSNP546 38TcSNP522 39TcSNP519 40TcSNP421
41TcSNP363 42TcSNP329 43TcSNP305 44TcSNP290 45TcSNP230
46TcSNP194 47TcSNP189 48TcSNP176 49TcSNP144 50TcSNP143
51TcSNP131 52TcSNP52 53TcSNP49 54TcSNP33 55TcSNP19
56TcSNP13