SNP Profiles of N 38 [T38]   View Data

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 Key

 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
CTACACTTCCGGAACCAACCGGGGCCAA
1._RUQ_1159
____AC__________AA__GG______
2._RUQ_1159
AGACACAAGGGGAAGGAAGGGGGGGG__
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
CCTTCCAATTTTTTGGGGTTAAGGCCCC
1._RUQ_1159
____CCACTT__TTGGGG__AAGG____
2._RUQ_1159
CCAACCACAAAA__CCGGAAAACC__GG
 29 30 31 32 33 34 35 36 37 38 39 40   
_Input profile
GGTTCCGTGGATTTTTTTCCGGAAX_XX_X
1._RUQ_1159
GGTT________TT______GG__X_XX_X
2._RUQ_1159
GG__GGACGG__AAAAAAGGCCAAX_XX_X

Input profile: N_38_[T38] RUQ_1159

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._N_38_[T38] RUQ_1159

96.7 %
15 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 

2._N_38_[T38] RUQ_1159

41.4 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP448 14TcSNP469 15TcSNP529
16TcSNP560 17TcSNP577 18TcSNP591 19TcSNP602 20TcSNP619
21TcSNP702 22TcSNP723 23TcSNP731 24TcSNP799 25TcSNP823
26TcSNP872 27TcSNP878 28TcSNP891 29TcSNP998 30TcSNP999
31TcSNP1060 32TcSNP1063 33TcSNP1111 34TcSNP1126 35TcSNP1253
36TcSNP1309 37TcSNP1439 38TcSNP1442 39TcSNP1458 40TcSNP1484