SNP Profiles of EQX-3161 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AA	AC	CC	CC	GG	GG	TT	CC	CC	CC	GG	CT	CC	TT
1._GC-07-045-2-25	__	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
2._GC-07-088-5-23	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
3._GC-07-045-2-25	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
4._GC-07-088-5-23	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
5._GC-07-089-5-24	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
6._GC-07-089-5-24	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
7._GC-07-089-5-24	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
8._GC-07-45-2-25	TT	__	CC	CC	AA	AG	TT	CT	CC	__	AG	CT	TT	TT
9._GC-07-045-2-25	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
10._GC-07-088-5-23	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
11._GC-07-45-2-25	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
12._GC-07-89-5-24	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
13._GC-07-89-5-24	TT	__	CC	CC	AA	AG	TT	CT	CC	TT	AG	CT	TT	TT
14._S.MIG._3161_[CHA]_Fld#_177_Plt#_6	TT	CC	__	CC	AA	AG	__	AG	GG	__	AG	AG	AA	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	AA	AA	CG	CC	CG	TT	AA	TT	GG	AT	AA	CC
1._GC-07-045-2-25	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
2._GC-07-088-5-23	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
3._GC-07-045-2-25	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
4._GC-07-088-5-23	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
5._GC-07-089-5-24	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
6._GC-07-089-5-24	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
7._GC-07-089-5-24	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
8._GC-07-45-2-25	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
9._GC-07-045-2-25	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	__
10._GC-07-088-5-23	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
11._GC-07-45-2-25	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
12._GC-07-89-5-24	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
13._GC-07-89-5-24	TT	AA	AA	GG	CG	CG	CG	CC	AA	TT	AG	AA	TT	CC
14._S.MIG._3161_[CHA]_Fld#_177_Plt#_6	AA	AA	AA	GG	CG	__	CG	GG	AA	AA	AG	AA	TT	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CG	AA	TT	TT	AG	CG	CC	AG	GT	GG	GT	AG	CC	AA
1._GC-07-045-2-25	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
2._GC-07-088-5-23	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
3._GC-07-045-2-25	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
4._GC-07-088-5-23	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
5._GC-07-089-5-24	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
6._GC-07-089-5-24	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
7._GC-07-089-5-24	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
8._GC-07-45-2-25	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
9._GC-07-045-2-25	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
10._GC-07-088-5-23	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
11._GC-07-45-2-25	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
12._GC-07-89-5-24	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
13._GC-07-89-5-24	CG	AA	TT	TT	AG	GG	CC	AA	GG	GG	TT	GG	CC	GG
14._S.MIG._3161_[CHA]_Fld#_177_Plt#_6	CG	AA	AA	AA	AG	GG	CC	AA	CC	CC	AA	GG	GG	GG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	GT	AT	CT	AA	GG	AG	CT	CC	GG	AG	GG	TT	CC
1._GC-07-045-2-25	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
2._GC-07-088-5-23	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	__
3._GC-07-045-2-25	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
4._GC-07-088-5-23	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
5._GC-07-089-5-24	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
6._GC-07-089-5-24	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
7._GC-07-089-5-24	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
8._GC-07-45-2-25	CC	GG	TT	TT	GG	AA	AA	CC	__	GG	GG	__	TT	TT
9._GC-07-045-2-25	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
10._GC-07-088-5-23	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
11._GC-07-45-2-25	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
12._GC-07-89-5-24	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
13._GC-07-89-5-24	CC	GG	TT	TT	GG	AA	AA	CC	AC	GG	GG	TT	TT	TT
14._S.MIG._3161_[CHA]_Fld#_177_Plt#_6	GG	CC	__	AA	__	AA	AA	GG	__	GG	GG	AA	AG	AA

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	CT	TT	AG	CC	CT	CT	AA	GG	GG	CC	AG	TT	GG	GG
1._GC-07-045-2-25	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
2._GC-07-088-5-23	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
3._GC-07-045-2-25	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
4._GC-07-088-5-23	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
5._GC-07-089-5-24	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
6._GC-07-089-5-24	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
7._GC-07-089-5-24	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
8._GC-07-45-2-25	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
9._GC-07-045-2-25	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
10._GC-07-088-5-23	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
11._GC-07-45-2-25	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
12._GC-07-89-5-24	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
13._GC-07-89-5-24	CC	TT	GG	CC	CC	TT	CC	GG	AG	AC	AA	GG	GG	AG
14._S.MIG._3161_[CHA]_Fld#_177_Plt#_6	GG	AA	GG	GG	GG	AA	CC	GG	AG	AC	AA	CC	CC	AG

	71	72	73	74	75	76	77	78	79	80	81	82	83	84
_Input profile	TT	CC	AG	TT	CC	AA	CC	AC	AG	AC	CG	CT	TT	AC
1._GC-07-045-2-25	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
2._GC-07-088-5-23	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
3._GC-07-045-2-25	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
4._GC-07-088-5-23	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
5._GC-07-089-5-24	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
6._GC-07-089-5-24	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
7._GC-07-089-5-24	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
8._GC-07-45-2-25	CC	CC	AA	TT	CC	GG	__	CC	GG	AA	CC	CC	AA	CC
9._GC-07-045-2-25	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
10._GC-07-088-5-23	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
11._GC-07-45-2-25	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
12._GC-07-89-5-24	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
13._GC-07-89-5-24	CC	CC	AA	TT	CC	GG	AC	CC	GG	AA	CC	CC	AA	CC
14._S.MIG._3161_[CHA]_Fld#_177_Plt#_6	__	__	__	AA	CC	GG	AC	CC	__	AA	GG	GG	AA	CC

	85	86	87	88	89	90	91	92	93	94	95
_Input profile	TT	TT	CT	TT	AA	CC	CC	TT	TT	AT	GG	X_X	X_X	X_X
1._GC-07-045-2-25	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
2._GC-07-088-5-23	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
3._GC-07-045-2-25	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
4._GC-07-088-5-23	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
5._GC-07-089-5-24	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
6._GC-07-089-5-24	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
7._GC-07-089-5-24	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
8._GC-07-45-2-25	CC	TT	CC	TT	GG	CC	CC	GG	CT	CC	CC	X_X	X_X	X_X
9._GC-07-045-2-25	CC	TT	CC	TT	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
10._GC-07-088-5-23	CC	TT	CC	__	GG	CC	CC	GG	CT	TT	GG	X_X	X_X	X_X
11._GC-07-45-2-25	CC	TT	CC	TT	GG	CC	CC	__	CT	CC	CC	X_X	X_X	X_X
12._GC-07-89-5-24	CC	TT	CC	TT	GG	CC	CC	GG	CT	CC	CC	X_X	X_X	X_X
13._GC-07-89-5-24	CC	TT	CC	TT	GG	CC	CC	GG	CT	CC	CC	X_X	X_X	X_X
14._S.MIG._3161_[CHA]_Fld#_177_Plt#_6	GG	AA	__	AA	__	__	GG	__	AG	AA	GG	X_X	X_X	X_X

Input profile: SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

Mars, 2018

1._SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

57.5 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP4

Mars, 2018

2._SAN_MIGUEL_3161_[CHA] GC-07-088-5-23

57.5 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Mars, 2018

3._SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

56.9 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Mars, 2018

4._SAN_MIGUEL_3161_[CHA] GC-07-088-5-23

56.9 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

5._SAN_MIGUEL_3161_[CHA] GC-07-089-5-24

56.9 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

6._SAN_MIGUEL_3161_[CHA] GC-07-089-5-24

56.9 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

Mars, 2018

7._SAN_MIGUEL_3161_[CHA] GC-07-089-5-24

56.9 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

8._SAN_MIGUEL_3161_[CHA] GC-07-45-2-25

56.7 %
90 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 7, Block: 2, Rep: 25, Tree: PL3

Notes: PL3 FP4

Mars, 2018

9._SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

56.5 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

10._SAN_MIGUEL_3161_[CHA] GC-07-088-5-23

56.5 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

11._SAN_MIGUEL_3161_[CHA] GC-07-45-2-25

55.9 %
93 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 7, Block: 2, Rep: 25, Tree: PL2

Notes: PL2 FP2

Mars, 2018

12._SAN_MIGUEL_3161_[CHA] GC-07-89-5-24

55.3 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 7, Block: 5, Rep: 24, Tree: PL1

Notes: PL1 FP1

Mars, 2018

13._SAN_MIGUEL_3161_[CHA] GC-07-89-5-24

55.3 %
94 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 7, Block: 5, Rep: 24, Tree: PL2

Notes: PL2 FP3

Mars, 2018

14._SAN_MIGUEL_3161_[CHA] S.MIG._3161_[CHA]_Fld#_177_Plt#_6

30.6 %
80 shared markers

View View all Clone Any

USDA-TARS, United States of America

Location: Field: 177, Tree: 6

Notes: TARS_Cacao_collection

Mars, 2018

Key to SNP Markers

1	TcSNP1075	2	TcSNP1350	3	TcSNP534	4	TcSNP591	5	TcSNP42
6	TcSNP418	7	TcSNP702	8	TcSNP1096	9	TcSNP1060	10	TcSNP1165
11	TcSNP429	12	TcSNP75	13	TcSNP891	14	TcSNP122	15	TcSNP316
16	TcSNP521	17	TcSNP860	18	TcSNP1062	19	TcSNP836	20	TcSNP878
21	TcSNP929	22	TcSNP413	23	TcSNP653	24	TcSNP1149	25	TcSNP174
26	TcSNP32	27	TcSNP372	28	TcSNP448	29	TcSNP872	30	TcSNP953
31	TcSNP1034	32	TcSNP1175	33	TcSNP1111	34	TcSNP577	35	TcSNP90
36	TcSNP998	37	TcSNP150	38	TcSNP28	39	TcSNP751	40	TcSNP1484
41	TcSNP602	42	TcSNP561	43	TcSNP894	44	TcSNP1063	45	TcSNP1126
46	TcSNP1270	47	TcSNP606	48	TcSNP329	49	TcSNP689	50	TcSNP944
51	TcSNP1242	52	TcSNP1383	53	TcSNP547	54	TcSNP776	55	TcSNP1309
56	TcSNP151	57	TcSNP1520	58	TcSNP799	59	TcSNP899	60	TcSNP226
61	TcSNP1439	62	TcSNP1442	63	TcSNP193	64	TcSNP25	65	TcSNP364
66	TcSNP144	67	TcSNP230	68	TcSNP560	69	TcSNP723	70	TcSNP731
71	TcSNP701	72	TcSNP1041	73	TcSNP645	74	TcSNP917	75	Tcm003s01336581
76	Tcm003s07402719	77	Tcm001s00947643	78	Tcm006s26664133	79	Tcm002s20575712	80	TcSNP529
81	TcSNP1458	82	TcSNP60	83	TcSNP430	84	TcSNP823	85	TcSNP619
86	TcSNP994	87	TcSNP1144	88	TcSNP1156	89	TcSNP469	90	TcSNP999
91	TcSNP242	92	TcSNP1253	93	TcSNP1414	94	TcSNP154	95	TcSNP240

SNP Profiles of EQX-3161 View Data

Show/Hide Profiles

Input profile: SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

1._SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

57.5 % 93 shared markers

2._SAN_MIGUEL_3161_[CHA] GC-07-088-5-23

57.5 % 93 shared markers

3._SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

56.9 % 94 shared markers

4._SAN_MIGUEL_3161_[CHA] GC-07-088-5-23

56.9 % 94 shared markers

5._SAN_MIGUEL_3161_[CHA] GC-07-089-5-24

56.9 % 94 shared markers

6._SAN_MIGUEL_3161_[CHA] GC-07-089-5-24

56.9 % 94 shared markers

7._SAN_MIGUEL_3161_[CHA] GC-07-089-5-24

56.9 % 94 shared markers

8._SAN_MIGUEL_3161_[CHA] GC-07-45-2-25

56.7 % 90 shared markers

9._SAN_MIGUEL_3161_[CHA] GC-07-045-2-25

56.5 % 93 shared markers

10._SAN_MIGUEL_3161_[CHA] GC-07-088-5-23

56.5 % 93 shared markers

11._SAN_MIGUEL_3161_[CHA] GC-07-45-2-25

55.9 % 93 shared markers

12._SAN_MIGUEL_3161_[CHA] GC-07-89-5-24

55.3 % 94 shared markers

13._SAN_MIGUEL_3161_[CHA] GC-07-89-5-24

55.3 % 94 shared markers

14._SAN_MIGUEL_3161_[CHA] S.MIG._3161_[CHA]_Fld#_177_Plt#_6

30.6 % 80 shared markers

57.5 %
93 shared markers

57.5 %
93 shared markers

56.9 %
94 shared markers

56.9 %
94 shared markers

56.9 %
94 shared markers

56.9 %
94 shared markers

56.9 %
94 shared markers

56.7 %
90 shared markers

56.5 %
93 shared markers

56.5 %
93 shared markers

55.9 %
93 shared markers

55.3 %
94 shared markers

55.3 %
94 shared markers

30.6 %
80 shared markers