SNP Profiles of IFC 5 [CIV]   View Data

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 1 2 3 4 5 6 7 8 9 10 11 12 13 14
_Input profile
ATACTTACAGAGCTCTCCCCGGTTCCCT
1._GU_144_/C___
ATACTTAC________CCCCGG__CC__
2._GU_144_/C___
____CCCC____CC__CC____TTCC__
3._GU_144_/C___
AA__CCACGGGGCTCCCCCCGGTTCCTT
4._GU_144_/C___
AA__CCACGGGGCTCCCCCCGGTTCCTT
5._GU_144_/C___
AA__CCACGGGGCTCCCCCCGGTTCCTT
6._GU_144_/C___
ATACCTACAGAGCTCTCCCTAGTTCTTT
7._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
8._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
9._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
10._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
11._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
12._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
13._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
14._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
15._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
16._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
17._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
18._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
19._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
20._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
21._GU_144_/C___
AACCCCCCGGGGTTCCCCCCGGTTCCTT
22._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
23._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
24._GU_144_/C___
AA__CCCCGGGGTTCCCCCCGGTTCCTT
25._GU_144_/C___
AA__CCAC________CCCCGG__CC__
26._GU_144_/C___
AA__CCAC________CCCCGG__CC__
27._GU_144_/C___
AA__CCAC________CCCCGG__CC__
28._GU_144_/C___
ATACCTAC________CCCTAG__CT__
29._GU_144_/C___
AA__CCCC________CCCCGG__CC__
30._GU_144_/C___
AA__CCCC________CCCCGG__CC__
31._GU_144_/C___
AA__CCCC________CCCCGG__CC__
32._GU_144_/C___
AA__CCCC________CCCCGG__CC__
33._GU_144_/C___
AA__CCCC________CCCCGG__CC__
34._GU_144_/C___
AA__CCCC________CCCCGG__CC__
35._GU_144_/C___
AA__CCCC________CCCCGG__CC__
36._GU_144_/C___
AA__CCCC________CCCCGG__CC__
37._GU_144_/C___
AA__CCCC________CCCCGG__CC__
38._GU_144_/C___
AA__CCCC________CCCCGG__CC__
39._GU_144_/C___
AA__CCCC________CCCCGG__CC__
40._GU_144_/C___
AA__CCCC________CCCCGG__CC__
41._GU_144_/C___
AA__CCCC________CCCCGG__CC__
42._GU_144_/C___
AA__CCCC________CCCCGG__CC__
43._GU_144_/C___
AA__CCCC________CCCCGG__CC__
44._GU_144_/C___
AA__CCCC________CCCCGG__CC__
45._GU_144_/C___
AA__CCCC________CCCCGG__CC__
46._GU_144_/C___
AACCCCCC________CCCCGG__CC__
47._GU_144_/C___
AACCCCCC________CCCCGG__CC__
48._GU_144_/C___
______CC____CC______________
49._GU_144_/C___
AACC__ACGGGG__GGGG__GGAAGGAA
50._GU_144_/C___
AACC__CCGGGG__GGGG__GGAAGGAA
51._GU_144_/C___
AACC__CCGGGG__GGGG__GGAAGGAA
52._GU_144_/C___
AACC__CCGGGG__GGGG__GGAAGGAA
53._GU_144_/C___
AACC__CCGGGG__GGGG__GGAAGGAA
54._GU_144_/C___
AA____CCGGGG__GGGG__GGAAGGAA
 15 16 17 18 19 20 21 22 23 24 25 26 27 28
_Input profile
AACCAACGCCCCCCAATTGGATAACGGG
1._GU_144_/C___
____AA____CC________ATAA__GG
2._GU_144_/C___
________CC________GG__AACCGG
3._GU_144_/C___
AACCGGGGCCGGTTAATTGGTTAACCGG
4._GU_144_/C___
AACCGGGGCCGGTTAATTGGTTAACCGG
5._GU_144_/C___
AACCGGGG__GGTTAATTGGTTAACCGG
6._GU_144_/C___
ATAAGGCGCGCGCTAACTGGATAACGCC
7._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
8._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
9._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
10._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
11._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
12._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
13._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
14._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
15._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
16._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
17._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
18._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
19._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
20._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
21._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
22._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
23._GU_144_/C___
AACCGGGGCCGGCTAA__GGAAAACCGG
24._GU_144_/C___
AACCGGGGCCGGCTAATTGGAAAACCGG
25._GU_144_/C___
____GG____GG________TTAA__GG
26._GU_144_/C___
____GG____GG________TTAA__GG
27._GU_144_/C___
____GG____GG________TTAA__GG
28._GU_144_/C___
____GG____CG________ATAA__CC
29._GU_144_/C___
____GG____GG________AAAA__GG
30._GU_144_/C___
____GG____GG________AAAA__GG
31._GU_144_/C___
____GG____GG________AAAA__GG
32._GU_144_/C___
____GG____GG________AAAA__GG
33._GU_144_/C___
____GG____GG________AAAA__GG
34._GU_144_/C___
____GG____GG________AAAA__GG
35._GU_144_/C___
____GG____GG________AAAA__GG
36._GU_144_/C___
____GG____GG________AAAA__GG
37._GU_144_/C___
____GG____GG________AAAA__GG
38._GU_144_/C___
____GG____GG________AAAA__GG
39._GU_144_/C___
____GG____GG________AAAA__GG
40._GU_144_/C___
____GG____GG________AAAA__GG
41._GU_144_/C___
____GG____GG________AAAA__GG
42._GU_144_/C___
____GG____GG________AAAA__GG
43._GU_144_/C___
____GG____GG________AAAA__GG
44._GU_144_/C___
____GG____GG________AAAA__GG
45._GU_144_/C___
____GG____GG________AAAA__GG
46._GU_144_/C___
____GG____GG________AAAA__GG
47._GU_144_/C___
____GG____GG________AAAA__GG
48._GU_144_/C___
____GGCT__________________GG
49._GU_144_/C___
TTCCGGCC__GGAAGGAAGGTTAAGGCC
50._GU_144_/C___
TTCCGGCC__GGAGGGAAGGAAAAGGCC
51._GU_144_/C___
TTCCGGCC__GGAGGGAAGGAAAAGGCC
52._GU_144_/C___
TTCCGGCC__GGAGGGAAGGAAAAGGCC
53._GU_144_/C___
TTCCGGCC__GGAGGGAAGGAAAAGGCC
54._GU_144_/C___
TTCCGGCC__GGAGGGAAGGAAAAGGCC
 29 30 31 32 33 34 35 36 37 38 39 40 41 42
_Input profile
AATTGTGGCCCCGGGTGTTTAACTAGCC
1._GU_144_/C___
AA______CC__GGGT____AA______
2._GU_144_/C___
______GGCCCCAATT____GGCC____
3._GU_144_/C___
AATTTTGGCCCCGGTTGGGGGGCCGGCC
4._GU_144_/C___
AATTTTGGCCCCGGTTGGGGGGCCGGCC
5._GU_144_/C___
AATTTTGGCCCCGGTTGGGGGGCCGGCC
6._GU_144_/C___
ATTTGTGGGGCCAGGGGTTTAACCGGCC
7._GU_144_/C___
AATTTTGGCCCCAATTGGGGGG__AGCC
8._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
9._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
10._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
11._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
12._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
13._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
14._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
15._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
16._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
17._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
18._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
19._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
20._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
21._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
22._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
23._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
24._GU_144_/C___
AATTTTGGCCCCAATTGGGGGGCCAGCC
25._GU_144_/C___
AA______CC__GGTT____GG______
26._GU_144_/C___
AA______CC__GGTT____GG______
27._GU_144_/C___
AA______CC__GGTT____GG______
28._GU_144_/C___
AT______GG__AGGG____AA______
29._GU_144_/C___
AA______CC__AATT____GG______
30._GU_144_/C___
AA______CC__AATT____GG______
31._GU_144_/C___
AA______CC__AATT____GG______
32._GU_144_/C___
AA______CC__AATT____GG______
33._GU_144_/C___
AA______CC__AATT____GG______
34._GU_144_/C___
AA______CC__AATT____GG______
35._GU_144_/C___
AA______CC__AATT____GG______
36._GU_144_/C___
AA______CC__AATT____GG______
37._GU_144_/C___
AA______CC__AATT____GG______
38._GU_144_/C___
AA______CC__AATT____GG______
39._GU_144_/C___
AA______CC__AATT____GG______
40._GU_144_/C___
AA______CC__AATT____GG______
41._GU_144_/C___
AA______CC__AATT____GG______
42._GU_144_/C___
AA______CC__AATT____GG______
43._GU_144_/C___
AA______CC__AATT____GG______
44._GU_144_/C___
AA______CC__AATT____GG______
45._GU_144_/C___
AA______CC__AATT____GG______
46._GU_144_/C___
AA______CC__AATT____GG______
47._GU_144_/C___
AA______CC__AATT____GG______
48._GU_144_/C___
________CC__AA________CC____
49._GU_144_/C___
AAAAAAGGCCCCGGAACCCCGGGGGGGG
50._GU_144_/C___
AAAAAAGGCCCCAAAACCCCGGGGAGGG
51._GU_144_/C___
AAAAAAGGCCCCAAAACCCCGGGGAGGG
52._GU_144_/C___
AAAAAAGGCCCCAAAACCCCGGGGAGGG
53._GU_144_/C___
AAAAAAGGCCCCAAAACCCCGGGGAGGG
54._GU_144_/C___
AAAAAAGGCCCCAAAACCCCGGGGAGGG
 43 44 45 46 47 48 49 50 51 52 53 54 55 56
_Input profile
GGTTCCAAGGAACCCCGGGGGTTTTTTT
1._GU_144_/C___
____CC__________________TT__
2._GU_144_/C___
GGTT____GG____________CT__TT
3._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
4._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
5._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
6._GU_144_/C___
GGTTTTAGAGAACCAAAGAGGGTTCCTT
7._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
8._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
9._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
10._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
11._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
12._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
13._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
14._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
15._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
16._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
17._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
18._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
19._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
20._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
21._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
22._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
23._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCCTT
24._GU_144_/C___
GGTTTTAAGGAACCCCGGGGTTTTCC__
25._GU_144_/C___
____TT__________________CC__
26._GU_144_/C___
____TT__________________CC__
27._GU_144_/C___
____TT__________________CC__
28._GU_144_/C___
____TT__________________CC__
29._GU_144_/C___
____TT__________________CC__
30._GU_144_/C___
____TT__________________CC__
31._GU_144_/C___
____TT__________________CC__
32._GU_144_/C___
____TT__________________CC__
33._GU_144_/C___
____TT__________________CC__
34._GU_144_/C___
____TT__________________CC__
35._GU_144_/C___
____TT__________________CC__
36._GU_144_/C___
____TT__________________CC__
37._GU_144_/C___
____TT__________________CC__
38._GU_144_/C___
____TT__________________CC__
39._GU_144_/C___
____TT__________________CC__
40._GU_144_/C___
____TT__________________CC__
41._GU_144_/C___
____TT__________________CC__
42._GU_144_/C___
____TT__________________CC__
43._GU_144_/C___
____TT__________________CC__
44._GU_144_/C___
____TT__________________CC__
45._GU_144_/C___
____TT__________________CC__
46._GU_144_/C___
____TT__________________CC__
47._GU_144_/C___
____TT__________________CC__
48._GU_144_/C___
________GG__________________
49._GU_144_/C___
CC__AA__GGAAGG__GGGGAAAGGGAA
50._GU_144_/C___
CC__AA__GGAAGG__GGGGAAAGGGAA
51._GU_144_/C___
CC__AA__GGAAGG__GGGGAAAGGGAA
52._GU_144_/C___
CC__AA__GGAAGG__GGGGAAAGGGAA
53._GU_144_/C___
CC__AA__GGAAGG__GGGGAAAGGGAA
54._GU_144_/C___
CC__AA__GGAAGG__GGGGAAAGGGAA
 57 58 59 60 61 62 63 64 65 66 67 68 69 70
_Input profile
AACCCTCCACCGGGACAATTGGGGTTCC
1._GU_144_/C___
__CC__CCACCG__ACAATTGG______
2._GU_144_/C___
__CCCCCCAA__GGAAGGGGGGAA____
3._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
4._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
5._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
6._GU_144_/C___
GGCCCCTTACCGGGCCAAGGGGAGTTCC
7._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
8._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
9._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
10._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
11._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
12._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
13._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
14._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
15._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
16._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
17._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
18._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
19._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
20._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
21._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
22._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
23._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
24._GU_144_/C___
GGCCCCCCAAGGGGAAGGGGGGAACCCC
25._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
26._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
27._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
28._GU_144_/C___
__CC__TTACCG__CCAAGGGG______
29._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
30._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
31._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
32._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
33._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
34._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
35._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
36._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
37._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
38._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
39._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
40._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
41._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
42._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
43._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
44._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
45._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
46._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
47._GU_144_/C___
__CC__CCAAGG__AAGGGGGG______
48._GU_144_/C___
GG____________AAGG__GGAA____
49._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
50._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
51._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
52._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
53._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
54._GU_144_/C___
GGGGGGGGAAGGGGAAGGCCCCAA____
 71 72 73 74 75 76 77 78 79 80 81 82 83 84
_Input profile
GGTTCCAGCCAAAACCGGCCATAATTTT
1._GU_144_/C___
GGTT__________CCGG______TTTT
2._GU_144_/C___
______________AAGG____AACC__
3._GU_144_/C___
GGCCAAAGCCCCGGAACGCCTTAACCCT
4._GU_144_/C___
GGCCAAAGCCCCGGAACGCCTTAACCCT
5._GU_144_/C___
GGCCAAAGCCCCGGAACGCCTTAACCCT
6._GU_144_/C___
AACCACAGCCCCAAACCCCCAACCTTCC
7._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
8._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
9._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
10._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
11._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
12._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
13._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
14._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
15._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
16._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
17._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
18._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
19._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
20._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
21._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
22._GU_144_/C___
GGCCAAAGCCCCGGAAGG__TTAACCCC
23._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
24._GU_144_/C___
GGCCAAAGCCCCGGAAGGCCTTAACCCC
25._GU_144_/C___
GGCC__________AACG______CCCT
26._GU_144_/C___
GGCC__________AACG______CCCT
27._GU_144_/C___
GGCC__________AACG______CCCT
28._GU_144_/C___
AACC__________ACCC______TTCC
29._GU_144_/C___
GGCC__________AAGG______CCCC
30._GU_144_/C___
GGCC__________AAGG______CCCC
31._GU_144_/C___
GGCC__________AAGG______CCCC
32._GU_144_/C___
GGCC__________AAGG______CCCC
33._GU_144_/C___
GGCC__________AAGG______CCCC
34._GU_144_/C___
GGCC__________AAGG______CCCC
35._GU_144_/C___
GGCC__________AAGG______CCCC
36._GU_144_/C___
GGCC__________AAGG______CCCC
37._GU_144_/C___
GGCC__________AAGG______CCCC
38._GU_144_/C___
GGCC__________AAGG______CCCC
39._GU_144_/C___
GGCC__________AAGG______CCCC
40._GU_144_/C___
GGCC__________AAGG______CCCC
41._GU_144_/C___
GGCC__________AAGG______CCCC
42._GU_144_/C___
GGCC__________AAGG______CCCC
43._GU_144_/C___
GGCC__________AAGG______CCCC
44._GU_144_/C___
GGCC__________AAGG______CCCC
45._GU_144_/C___
GGCC__________AAGG______CCCC
46._GU_144_/C___
GGCC__________AAGG______CCCC
47._GU_144_/C___
AGCC__________AAGG______CCCC
48._GU_144_/C___
AG____________AAGG____AA____
49._GU_144_/C___
__GGAAAGCCCC__AACGGGTTAAGGAG
50._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
51._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
52._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
53._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
54._GU_144_/C___
__GGAAAGCCCC__AACCGGTTAAGGGG
 85 86 87 88 89 90 91 92 93      
_Input profile
TTCCAACTCCTTCTAAGGX_XX_XX_XX_XX_X
1._GU_144_/C___
TT__AA__CCTTCT____X_XX_XX_XX_XX_X
2._GU_144_/C___
____GGCCCCTT______X_XX_XX_XX_XX_X
3._GU_144_/C___
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
4._GU_144_/C___
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
5._GU_144_/C___
CCCCAGCCCCTTTTAAGGX_XX_XX_XX_XX_X
6._GU_144_/C___
CCCTAGCTTTGTCTTTGGX_XX_XX_XX_XX_X
7._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
8._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
9._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
10._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
11._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
12._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
13._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
14._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
15._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
16._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
17._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
18._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
19._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
20._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
21._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
22._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
23._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
24._GU_144_/C___
CCCCGGCCCCTTTTAAGGX_XX_XX_XX_XX_X
25._GU_144_/C___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
26._GU_144_/C___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
27._GU_144_/C___
CC__AG__CCTTTT____X_XX_XX_XX_XX_X
28._GU_144_/C___
CC__AG__TTGTCT____X_XX_XX_XX_XX_X
29._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
30._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
31._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
32._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
33._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
34._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
35._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
36._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
37._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
38._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
39._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
40._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
41._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
42._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
43._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
44._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
45._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
46._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
47._GU_144_/C___
CC__GG__CCTTTT____X_XX_XX_XX_XX_X
48._GU_144_/C___
CC____CC__TT______X_XX_XX_XX_XX_X
49._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
50._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
51._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
52._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
53._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X
54._GU_144_/C___
__GG____GGAAAATTGGX_XX_XX_XX_XX_X

Input profile: GU_144_/C GC-08-223-6-19

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

1._GU_144_/C

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 1 > FP
 Dapeng Zhang, 2016

2._GU_144_/C RUQ_191

65.9 %
41 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

3._GU_144_/C GC-01-073-4-09

65.2 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

4._GU_144_/C GC-01-073-4-09

65.2 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

5._GU_144_/C GC-08-224-6-20

64.8 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

6._GU_144_/C GC-08-224-6-20

64 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

7._GU_144_/C GC-08-224-6-20

63.7 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

8._GU_144_/C GC-01-073-4-09

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

9._GU_144_/C GC-01-073-4-09

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

10._GU_144_/C GC-01-073-4-09

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5 > FP4
 Mars, 2018

11._GU_144_/C GC-01-073-4-09

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

12._GU_144_/C GC-01-073-4-09

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

13._GU_144_/C GC-08-223-6-19

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

14._GU_144_/C GC-08-223-6-19

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

15._GU_144_/C GC-08-223-6-19

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

16._GU_144_/C GC-08-223-6-19

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

17._GU_144_/C GC-08-223-6-19

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

18._GU_144_/C GC-08-224-6-20

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

19._GU_144_/C GC-08-224-6-20

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

20._GU_144_/C GC-08-224-6-20

63.6 %
92 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

21._GU_144_/C GC-01-073-4-09

63.4 %
93 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

22._GU_144_/C GC-01-073-4-09

63.2 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

23._GU_144_/C GC-01-073-4-09

63.2 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12 > FP3
 Mars, 2018

24._GU_144_/C GC-08-223-6-19

63.2 %
91 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

25._GU_144_/C

55.3 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 7
 Dapeng Zhang, 2016

26._GU_144_/C

55.3 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 9
 Dapeng Zhang, 2016

27._GU_144_/C

55.3 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 3
 Dapeng Zhang, 2016

28._GU_144_/C

51.3 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 5
 Dapeng Zhang, 2016

29._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 2
 Dapeng Zhang, 2016

30._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 8
 Dapeng Zhang, 2016

31._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 3
 Dapeng Zhang, 2016

32._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 2
 Dapeng Zhang, 2016

33._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8620 1
 Dapeng Zhang, 2016

34._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 3 > FP
 Dapeng Zhang, 2016

35._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 10
 Dapeng Zhang, 2016

36._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 9
 Dapeng Zhang, 2016

37._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 7
 Dapeng Zhang, 2016

38._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 5
 Dapeng Zhang, 2016

39._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8619 2
 Dapeng Zhang, 2016

40._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 5 > FP
 Dapeng Zhang, 2016

41._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 12 > F
 Dapeng Zhang, 2016

42._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 1 > FP
 Dapeng Zhang, 2016

43._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 13
 Dapeng Zhang, 2016

44._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 10
 Dapeng Zhang, 2016

45._GU_144_/C

50 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 8
 Dapeng Zhang, 2016

46._GU_144_/C

50 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1409 6
 Dapeng Zhang, 2016

47._GU_144_/C RUQ_191

48.7 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

48._GU_144_/C RUQ_191

47.6 %
21 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023
Population Assignment: 
View Data
GU
0.997

49._GU_144_/C GC-01-73-4-9

32.3 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 3
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

50._GU_144_/C GC-01-73-4-9

30.4 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 1 > FP1
Notes: Brazil_Selections_Poss_grandparent
 Mars, 2018

51._GU_144_/C RUQ_191

30.4 %
79 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

52._GU_144_/C MITC-000578

30.4 %
79 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

53._GU_144_/C MITC-000615

30.4 %
79 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

54._GU_144_/C GC-01-73-4-9

30.1 %
78 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Field: 1, Block: 4, Rep: 9, Tree: 2
Notes: MCCS_Structure_refs_above_0.9membership
 Mars, 2018

 

  Key to SNP Markers

1TcSNP1075 2TcSNP1350 3TcSNP534 4TcSNP591 5TcSNP42
6TcSNP418 7TcSNP702 8TcSNP1096 9TcSNP1060 10TcSNP1165
11TcSNP429 12TcSNP75 13TcSNP891 14TcSNP122 15TcSNP316
16TcSNP521 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP653 23TcSNP1149 24TcSNP174 25TcSNP32
26TcSNP372 27TcSNP448 28TcSNP872 29TcSNP953 30TcSNP1034
31TcSNP1175 32TcSNP1111 33TcSNP577 34TcSNP90 35TcSNP998
36TcSNP150 37TcSNP28 38TcSNP751 39TcSNP1484 40TcSNP602
41TcSNP561 42TcSNP894 43TcSNP1063 44TcSNP1126 45TcSNP1270
46TcSNP606 47TcSNP329 48TcSNP689 49TcSNP944 50TcSNP1242
51TcSNP1383 52TcSNP547 53TcSNP776 54TcSNP1309 55TcSNP1520
56TcSNP799 57TcSNP899 58TcSNP226 59TcSNP1439 60TcSNP1442
61TcSNP193 62TcSNP25 63TcSNP364 64TcSNP144 65TcSNP230
66TcSNP560 67TcSNP723 68TcSNP731 69TcSNP701 70TcSNP1041
71TcSNP645 72TcSNP917 73Tcm003s01336581 74Tcm003s07402719 75Tcm001s00947643
76Tcm006s26664133 77Tcm002s20575712 78TcSNP529 79TcSNP1458 80TcSNP60
81TcSNP430 82TcSNP823 83TcSNP619 84TcSNP994 85TcSNP1144
86TcSNP1156 87TcSNP469 88TcSNP999 89TcSNP242 90TcSNP1253
91TcSNP1414 92TcSNP154 93TcSNP240