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M 4 [IDN] Group Name Theobroma cacao

McMahon, Peter J, A Iswanto, Agung W Susilo, E Sulistyowati, A Wahab, M Imron, & A Purwantara (2009)
On-Farm Selection for Quality and Resistance to Pest/Diseases of Cocoa in Sulawesi: (I) Performance of Selections against Cocoa Pod Borer, Conopomorpha Cramerella. International Journal of Pest Management 55 (4): 325–37

Location: Farm, Maluku, Indonesia.

Notes: Selections made as part of Mars-ACIAR project (2001-2006) using farmer-participatory methodology to select and test promising cocoa genotypes on farms in Sulawesi, Indonesia. Selected for CPB resistance.

SNP/SSR

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Synonyms: M04 [IDN]

PEDIGREE DETAILS

Parents:: Interpopulation hybrid x Unknown - inferred cluster using STRUCTURE, 15 SSR markers and 153 international reference types
Dinarti, D et al., 2015

Reference

Dinarti, D, Agung W Susilo, Lyndel W Meinhardt, K Ji, Lambert A Motilal, S Mischke, & Dapeng Zhang 2015
Genetic Diversity and Parentage in Farmer Selections of Cacao from Southern Sulawesi, Indonesia Revealed by Microsatellite Markers. Breeding Science 65 (5): 438–46
DOI: 10.1270/jsbbs.65.438

GENOME/TRANSCRIPTOME DATA LINKS

Cornejo, O.E. et al., 2018

Reference

BioProject: PRJNA486011 NCBI ENA FASTQ

Project: PRJEB28591 EVA (project) EVA (analysis)

Library Source: Genomic

Run: SRR7774262 NCBI ENA FASTQ

Experiment: SRX4629562

BioSample: SAMN09934488

SampleName: M04

SampleSource: Indonesia (gDNA USDA)

HELD IN

Indonesia, Indonesian Coffee and Cocoa Research Institute (ICCRI): List received in 2008 Reference

Reference

Susilo, A. 2008
The list of germplasm collected by ICCRI. Personal communication from Agung Susilo, July 2008.; • Accession: IDN-13-TCAC-00472; - Local Name: M4

DISEASE

Phytophthora: Moderately Susceptible, sp. P. palmivora (Pod).; Note: Average severity = 0.82. 11 trees sampled; McMahon, P. et al., 2006

Reference

McMahon, P., Wahab, A., Susilo, A.W., Iswanto, A., Purwantara, A., Sulistyowati, E., Junianto, Y., Sukamto, S., Suntoro, Mufrihati, E., Imron, M., Hidayat, M., Ismail, D., Lambert, S., Guest, D, and Keane, P. 2006
Selection for Quality and Resistance to Phytophthora Pod Rot, Cocoa Pod Borer and Vascular-Streak Dieback in Cocoa in Sulawesi. In: Proceedings of the 15th International Cocoa Research Conference, San Jose, Costa Rica (2006). Cocoa Producers' Alliance, Lagos, Nigeria.
Disease Yield Butterfat
Vascular Streak Dieback: Moderately Susceptible; Note: Tested at Bonebone, North Luwu, and Allacimpo, Pinrang; H. bin Purung et al., 2009

Reference

H. bin Purung, H. Mohammed, Kartika Fauziah, M. Imron, Hilman, E. Sulistyowati, S. Sukamto, A.W. Susilo, E. Mardiono, A. Purwantara, A. Iswanto, Y. Suarni, Octovanius, Suprapto, Sudirman, M. Hidayat, D. Ismail, S. Lambert, J. Neilson, D.I. Guest, P.J. McMahon & P.J Keane 2009
Testing Local Genotypes with Cocoa Smallholders in Sulawesi. In: Proceedings of the 16th International Cocoa Research Conference, Bali, Indonesia (November 2009). Cocoa Producers' Alliance, Lagos, Nigeria.
Disease Yield Bean Butterfat

YIELD

McMahon, P. et al., 2006: Seed Index: 126.0 (dried beans per 100g); Reference

Reference

McMahon, P., Wahab, A., Susilo, A.W., Iswanto, A., Purwantara, A., Sulistyowati, E., Junianto, Y., Sukamto, S., Suntoro, Mufrihati, E., Imron, M., Hidayat, M., Ismail, D., Lambert, S., Guest, D, and Keane, P. 2006
Selection for Quality and Resistance to Phytophthora Pod Rot, Cocoa Pod Borer and Vascular-Streak Dieback in Cocoa in Sulawesi. In: Proceedings of the 15th International Cocoa Research Conference, San Jose, Costa Rica (2006). Cocoa Producers' Alliance, Lagos, Nigeria.
Disease Yield Butterfat

BUTTERFAT

McMahon, P. et al., 2006: Butterfat Content: 47.50 %; Testa: 30.62 %; Reference

Reference

McMahon, P., Wahab, A., Susilo, A.W., Iswanto, A., Purwantara, A., Sulistyowati, E., Junianto, Y., Sukamto, S., Suntoro, Mufrihati, E., Imron, M., Hidayat, M., Ismail, D., Lambert, S., Guest, D, and Keane, P. 2006
Selection for Quality and Resistance to Phytophthora Pod Rot, Cocoa Pod Borer and Vascular-Streak Dieback in Cocoa in Sulawesi. In: Proceedings of the 15th International Cocoa Research Conference, San Jose, Costa Rica (2006). Cocoa Producers' Alliance, Lagos, Nigeria.
Disease Yield Butterfat

REFERENCES

McMahon, Peter J, A Iswanto, Agung W Susilo, E Sulistyowati, A Wahab, M Imron, & A Purwantara (2009) On-Farm Selection for Quality and Resistance to Pest/Diseases of Cocoa in Sulawesi: (I) Performance of Selections against Cocoa Pod Borer, Conopomorpha Cramerella. International Journal of Pest Management 55 (4): 325–37

Dinarti, D, Agung W Susilo, Lyndel W Meinhardt, K Ji, Lambert A Motilal, S Mischke, & Dapeng Zhang (2015) Genetic Diversity and Parentage in Farmer Selections of Cacao from Southern Sulawesi, Indonesia Revealed by Microsatellite Markers. Breeding Science 65 (5): 438–46

Cornejo, O.E., Muh-Ching Yee, Victor Dominguez, Mary Andrews, Alexandra Sockell, Erika Strandberg, Donald Livingstone III, Conrad Stack, Alberto Romero, Pathmanathan Umaharan, Stefan Royaert, Nilesh R. Tawari, Pauline Ng, Osman Gutierrez, Wilbert Phillips, Keithanne Mockaitis, Carlos D. Bustamante & Juan C. Motamayor (2018) Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process. Commun Biol 1, 167

Susilo, A. (2008) The list of germplasm collected by ICCRI. Personal communication from Agung Susilo, July 2008.

McMahon, P., Wahab, A., Susilo, A.W., Iswanto, A., Purwantara, A., Sulistyowati, E., Junianto, Y., Sukamto, S., Suntoro, Mufrihati, E., Imron, M., Hidayat, M., Ismail, D., Lambert, S., Guest, D, and Keane, P. (2006) Selection for Quality and Resistance to Phytophthora Pod Rot, Cocoa Pod Borer and Vascular-Streak Dieback in Cocoa in Sulawesi. In: Proceedings of the 15th International Cocoa Research Conference, San Jose, Costa Rica (2006). Cocoa Producers' Alliance, Lagos, Nigeria.

H. bin Purung, H. Mohammed, Kartika Fauziah, M. Imron, Hilman, E. Sulistyowati, S. Sukamto, A.W. Susilo, E. Mardiono, A. Purwantara, A. Iswanto, Y. Suarni, Octovanius, Suprapto, Sudirman, M. Hidayat, D. Ismail, S. Lambert, J. Neilson, D.I. Guest, P.J. McMahon & P.J Keane (2009) Testing Local Genotypes with Cocoa Smallholders in Sulawesi. In: Proceedings of the 16th International Cocoa Research Conference, Bali, Indonesia (November 2009). Cocoa Producers' Alliance, Lagos, Nigeria.